RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CTXN2P0C2S0 81 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 TBPP20226 339 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 NFYAP23511 347 aaPredicted RBP0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 G6PCP35575 357 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 ATP6V1E1P36543 226 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 VSNL1P62760 191 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 MSMO1Q15800 293 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 Q1RN00 199 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 TMEM97Q5BJF2 176 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 HACD4Q5VWC8 232 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 C14orf178Q8N769 122 aaPredicted RBP0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR10G2Q8NGC3 310 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR5AK2Q8NH90 309 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 MRGPRFQ96AM1 343 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 CAMK2N2Q96S95 79 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 TMEM147Q9BVK8 224 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRO2289Q9P1D8 64 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 CKLFQ9UBR5 152 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 SNX12Q9UMY4 172 aa0.89□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRBV7-3A0A075B6L6 115 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 LOC100506127A0A0U1RQW1 187 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 GABARAPH6UMI1 98 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 GNRH2O43555 120 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 GABARAPO95166 117 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 UBBP0CG47 229 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 ESDP10768 282 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 CXCL2P19875 107 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 LPAR6P43657 344 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 WNT4P56705 351 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 STX3Q13277 289 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 SURF2Q15527 256 aaPredicted RBP0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 HSD17B12Q53GQ0 312 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 C10orf91Q5T1B1 145 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 LCN15Q6UWW0 184 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 IZUMO2Q6UXV1 221 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 FAM231DQ6ZW35 169 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 S100A7AQ86SG5 101 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 GID4Q8IVV7 300 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 MTURNQ8N3F0 131 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZFAND2AQ8N6M9 145 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR51H1Q8NH63 302 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 CHCHD10Q8WYQ3 142 aaPredicted RBP0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 FAM162AQ96A26 154 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 PLEKHB2Q96CS7 222 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 YIPF6Q96EC8 236 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 TMEM80Q96HE8 168 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 FAM19A4Q96LR4 140 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 C16orf45Q96MC5 204 aaPredicted RBP0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 PDCD10Q9BUL8 212 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 CYSTM1Q9H1C7 97 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 GEMIN7Q9H840 131 aaKnown RBP0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 AMBNQ9NP70 447 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZNF492Q9P255 531 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 COMMD3Q9UBI1 195 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 RNF24Q9Y225 148 aa0.88□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRBV25-1A0A075B6N4 114 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 TRBV10-1A0A0K0K1A3 114 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PNMA8CA0A1B0GUJ8 204 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 A8MWV9 139 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRSS46E5RG02 174 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 J3QLW9 94 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 BIRC5O15392 142 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRKYO43930 277 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGKV1-5P01602 117 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 VPREB1P12018 145 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 TALDO1P37837 337 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 CSN1S1P47710 185 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 KRTAP12-4P60329 112 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 S100A10P60903 97 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 ERCC8Q13216 396 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 BSXQ3C1V8 233 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 GPR107Q5VW38 600 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PRSS48Q7RTY5 328 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 SSBP3-AS1Q7Z2R9 100 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 KRTAP13-1Q8IUC0 172 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 EXOC3-AS1Q8N2X6 119 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 OR5A1Q8NGJ0 315 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PTH2Q96A98 100 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZNF486Q96H40 463 aaPredicted RBP0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 BTF3L4Q96K17 158 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 AQP10Q96PS8 301 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 MYCBPQ99417 103 aaPredicted RBP0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 ZNF2Q9BSG1 426 aaPredicted RBP0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 GNB1LQ9BYB4 327 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 AGPAT4-IT1Q9H0P7 198 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 DIABLOQ9NR28 239 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 CYTL1Q9NRR1 136 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 GID8Q9NWU2 228 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 WARS2Q9UGM6 360 aaKnown RBP0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 NAGKQ9UJ70 344 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PSG8Q9UQ74 426 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 CHTOPQ9Y3Y2 248 aaKnown RBP0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 PXMP4Q9Y6I8 212 aa0.87□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGLV4-60A0A075B6I1 120 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 IGKV3OR2-268A0A0C4DH90 116 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 LOC107984156A0A0G2JMH3 177 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 PAGE4O60829 102 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 FABP3P05413 133 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 CTRLP40313 264 aa0.86□□□□□ -2.27
TRAV1-1-201ENST00000542354 MRPL28Q13084 256 aaKnown RBP0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms