RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CRIP1P50238 77 aa12.46□□□□□ -0.42
VARS2-212ENST00000542001 DEFB112Q30KQ8 113 aa12.46□□□□□ -0.42
VARS2-212ENST00000542001 SPXQ9BT56 116 aa12.46□□□□□ -0.42
VARS2-212ENST00000542001 SLC25A16P16260 332 aa12.45□□□□□ -0.42
VARS2-212ENST00000542001 NPBQ8NG41 125 aa12.45□□□□□ -0.42
VARS2-212ENST00000542001 K7EP13 123 aa12.45□□□□□ -0.42
VARS2-212ENST00000542001 NSUN5P1Q3KNT7 163 aa12.45□□□□□ -0.42
VARS2-212ENST00000542001 C19orf54Q5BKX5 351 aa12.45□□□□□ -0.42
VARS2-212ENST00000542001 PCSK5Q92824 1860 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 ADARB2-AS1A8MUL3 147 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 USMG5Q96IX5 58 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 UBE2L6O14933 153 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
VARS2-212ENST00000542001 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 AJUBAQ96IF1 538 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 JPT2Q9H910 190 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 H7C1H1 209 aa12.44□□□□□ -0.42
VARS2-212ENST00000542001 RPL35AP18077 110 aaKnown RBP12.44□□□□□ -0.42
VARS2-212ENST00000542001 CFHR3Q02985 330 aa12.43□□□□□ -0.42
VARS2-212ENST00000542001 SDHAF1A6NFY7 115 aa12.43□□□□□ -0.42
VARS2-212ENST00000542001 PPP1R17O96001 155 aa12.43□□□□□ -0.42
VARS2-212ENST00000542001 HTN3P15516 51 aa12.43□□□□□ -0.42
VARS2-212ENST00000542001 Q6ZQT7 251 aa12.43□□□□□ -0.42
VARS2-212ENST00000542001 SP5Q6BEB4 398 aaPredicted RBP12.43□□□□□ -0.42
VARS2-212ENST00000542001 STHQ8IWL8 128 aa12.43□□□□□ -0.42
VARS2-212ENST00000542001 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 Q8N8P6 123 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 PGPEP1Q9NXJ5 209 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 TRGV1A0A0A0MS02 117 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 A0A1B0GV72 72 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 RNASE1P07998 156 aaKnown RBP12.42□□□□□ -0.42
VARS2-212ENST00000542001 TCTEX1D4Q5JR98 221 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 INS-IGF2F8WCM5 200 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 SAP30O75446 220 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 GAS8-AS1O95177 125 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 SMIM2Q9BVW6 85 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 MUC3AQ02505 3323 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 TACC2O95359 2948 aa12.42□□□□□ -0.42
VARS2-212ENST00000542001 ETDBQ3ZM63 59 aa12.41□□□□□ -0.42
VARS2-212ENST00000542001 ESDP10768 282 aa12.41□□□□□ -0.42
VARS2-212ENST00000542001 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
VARS2-212ENST00000542001 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
VARS2-212ENST00000542001 COL4A2P08572 1712 aa12.4□□□□□ -0.42
VARS2-212ENST00000542001 VCYO14598 125 aa12.4□□□□□ -0.42
VARS2-212ENST00000542001 LMO4P61968 165 aa12.4□□□□□ -0.42
VARS2-212ENST00000542001 C5orf56Q8N8D9 126 aa12.4□□□□□ -0.42
VARS2-212ENST00000542001 CCDC140Q96MF4 163 aa12.4□□□□□ -0.42
VARS2-212ENST00000542001 PRADC1Q9BSG0 188 aa12.4□□□□□ -0.42
VARS2-212ENST00000542001 CRYGBP07316 175 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 SPATA12Q7Z6I5 190 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 SIRPDQ9H106 197 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 NDUFA4O00483 81 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 PF4P02776 101 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 C10orf99Q6UWK7 81 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 C11orf68Q9H3H3 251 aaKnown RBP12.39□□□□□ -0.43
VARS2-212ENST00000542001 TRAV13-1A0A0B4J241 112 aa12.39□□□□□ -0.43
VARS2-212ENST00000542001 MRPL52Q86TS9 123 aaKnown RBP12.38□□□□□ -0.43
VARS2-212ENST00000542001 IGHV7-4-1A0A0J9YVY3 117 aa12.38□□□□□ -0.43
VARS2-212ENST00000542001 A0A1W2PPR1 153 aa12.38□□□□□ -0.43
VARS2-212ENST00000542001 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
VARS2-212ENST00000542001 H3BMG7 143 aa12.38□□□□□ -0.43
VARS2-212ENST00000542001 LINC01356Q8N9X3 169 aa12.38□□□□□ -0.43
VARS2-212ENST00000542001 OR13C6PQ8NH95 151 aa12.38□□□□□ -0.43
VARS2-212ENST00000542001 PLNP26678 52 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 LINC01545Q5VT33 79 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 COX6CP09669 75 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 RPL39P62891 51 aaKnown RBP12.37□□□□□ -0.43
VARS2-212ENST00000542001 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 Q96MF0 132 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 LINC01549A6NIU2 74 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 CDKN1BP46527 198 aa12.37□□□□□ -0.43
VARS2-212ENST00000542001 PRSS29PA6NIE9 313 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 IGLV2-11P01706 119 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 SIGMAR1Q99720 223 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 PTPRBP23467 1997 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 MYCNOSP40205 109 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 APRG1Q8IVJ8 170 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 AGRNO00468 2067 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 PEMTQ9UBM1 199 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
VARS2-212ENST00000542001 FXYD2P54710 66 aa12.35□□□□□ -0.43
VARS2-212ENST00000542001 Q6ZS46 218 aa12.35□□□□□ -0.43
VARS2-212ENST00000542001 TRBV25-1A0A075B6N4 114 aa12.35□□□□□ -0.43
VARS2-212ENST00000542001 SLURP1P55000 103 aa12.35□□□□□ -0.43
VARS2-212ENST00000542001 SMAD5-AS1Q9Y6J3 95 aa12.35□□□□□ -0.43
VARS2-212ENST00000542001 SCRT2Q9NQ03 307 aa12.35□□□□□ -0.43
VARS2-212ENST00000542001 HECTD1Q9ULT8 2610 aa12.34□□□□□ -0.43
VARS2-212ENST00000542001 LY6LH3BQJ8 138 aa12.34□□□□□ -0.43
VARS2-212ENST00000542001 F8VRH5 84 aa12.34□□□□□ -0.43
VARS2-212ENST00000542001 DEFB125Q8N687 156 aa12.34□□□□□ -0.43
VARS2-212ENST00000542001 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
VARS2-212ENST00000542001 C9orf118A6NHY6 69 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms