RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TRAV13-1A0A0B4J241 112 aa11.27□□□□□ -0.6
GCFC2-211ENST00000541687 AMTNQ6UX39 209 aa11.27□□□□□ -0.6
GCFC2-211ENST00000541687 NPBQ8NG41 125 aa11.27□□□□□ -0.6
GCFC2-211ENST00000541687 PHLDA1Q8WV24 401 aaPredicted RBP11.27□□□□□ -0.6
GCFC2-211ENST00000541687 COL6A3P12111 3177 aa11.27□□□□□ -0.6
GCFC2-211ENST00000541687 FAM223BA6NKX1 122 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
GCFC2-211ENST00000541687 HIST1H4AP62805 103 aaKnown RBP11.27□□□□□ -0.61
GCFC2-211ENST00000541687 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 MBD6Q96DN6 1003 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 MLST8Q9BVC4 326 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 KNCNA6PVL3 124 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 LINC00310P59036 64 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
GCFC2-211ENST00000541687 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 K7EMI3 77 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 VCYO14598 125 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 LGALS9CQ6DKI2 356 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
GCFC2-211ENST00000541687 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 LINC01548A6NM66 108 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 MALP21145 153 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 SPINK13Q1W4C9 94 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 SP5Q6BEB4 398 aaPredicted RBP11.26□□□□□ -0.61
GCFC2-211ENST00000541687 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 K7ERJ3 54 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 BLCAPP62952 87 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 C2orf66Q6UXQ4 117 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 USMG5Q96IX5 58 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 YAE1D1Q9NRH1 226 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 ADARB2-AS1A8MUL3 147 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 MSMBP08118 114 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
GCFC2-211ENST00000541687 K7EP13 123 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 GNRH2O43555 120 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 BUB3O43684 328 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 GAGE1Q13065 139 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 Q8N8P6 123 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
GCFC2-211ENST00000541687 FREM2Q5SZK8 3169 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 WI2-2373I1.2A0A1W2PRP0 233 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
GCFC2-211ENST00000541687 MORN3Q6PF18 240 aaPredicted RBP11.25□□□□□ -0.61
GCFC2-211ENST00000541687 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.24□□□□□ -0.61
GCFC2-211ENST00000541687 SLC25A16P16260 332 aa11.24□□□□□ -0.61
GCFC2-211ENST00000541687 ZNF80P51504 273 aaPredicted RBP11.24□□□□□ -0.61
GCFC2-211ENST00000541687 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
GCFC2-211ENST00000541687 IGHV4-61A0A0C4DH41 118 aa11.24□□□□□ -0.61
GCFC2-211ENST00000541687 TRGV1A0A0A0MS02 117 aa11.24□□□□□ -0.61
GCFC2-211ENST00000541687 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 IGHV4-38-2P0DP08 117 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 TRGV11A0A075B6L2 103 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 H3BMG7 143 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 CRPP02741 224 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 TP53TG1Q9Y2A0 90 aa11.23□□□□□ -0.61
GCFC2-211ENST00000541687 SLC25A20O43772 301 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 LINC01545Q5VT33 79 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 PRIMA1Q86XR5 153 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 TMEM86BQ8N661 226 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 NRGNQ92686 78 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 JPT2Q9H910 190 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 PEMTQ9UBM1 199 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 ADAMTS20P59510 1910 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
GCFC2-211ENST00000541687 Q71RC1 249 aaPredicted RBP11.22□□□□□ -0.61
GCFC2-211ENST00000541687 SMIM2Q9BVW6 85 aa11.21□□□□□ -0.61
GCFC2-211ENST00000541687 A0A087WX48 190 aa11.21□□□□□ -0.61
GCFC2-211ENST00000541687 TET2Q6N021 2002 aaPredicted RBP11.21□□□□□ -0.62
GCFC2-211ENST00000541687 C9orf118A6NHY6 69 aa11.21□□□□□ -0.62
GCFC2-211ENST00000541687 PKD1L2Q7Z442 2459 aa11.21□□□□□ -0.62
GCFC2-211ENST00000541687 MTORP42345 2549 aa11.21□□□□□ -0.62
GCFC2-211ENST00000541687 CRYGBP07316 175 aa11.21□□□□□ -0.62
GCFC2-211ENST00000541687 CRIP1P50238 77 aa11.21□□□□□ -0.62
GCFC2-211ENST00000541687 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.62
GCFC2-211ENST00000541687 CDSNQ15517 529 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 DEFB125Q8N687 156 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 RPL39LQ96EH5 51 aaKnown RBP11.2□□□□□ -0.62
GCFC2-211ENST00000541687 TIMM21Q9BVV7 248 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 EDA2RQ9HAV5 297 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 SCRT2Q9NQ03 307 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
GCFC2-211ENST00000541687 NDUFA4O00483 81 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 DEFB131AP59861 70 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 MYCNOSP40205 109 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 ZNF415Q09FC8 603 aa11.2□□□□□ -0.62
GCFC2-211ENST00000541687 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
GCFC2-211ENST00000541687 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
GCFC2-211ENST00000541687 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
GCFC2-211ENST00000541687 RPL36ALQ969Q0 106 aaKnown RBP11.19□□□□□ -0.62
GCFC2-211ENST00000541687 C6orf226Q5I0X4 101 aa11.19□□□□□ -0.62
GCFC2-211ENST00000541687 MGAQ8IWI9 3026 aa11.19□□□□□ -0.62
GCFC2-211ENST00000541687 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
GCFC2-211ENST00000541687 EPG5Q9HCE0 2579 aa11.19□□□□□ -0.62
GCFC2-211ENST00000541687 UNQ9165/PRO28630Q6UXU0 137 aa11.18□□□□□ -0.62
GCFC2-211ENST00000541687 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
GCFC2-211ENST00000541687 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms