RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 C5orf24Q7Z6I8 188 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 LGALS9O00182 355 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 ZNRD1Q9P1U0 126 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 TRIOBPQ9H2D6 2365 aa12.15□□□□□ -0.46
HMGA2-210ENST00000541363 Q6ZRM9 215 aa12.15□□□□□ -0.47
HMGA2-210ENST00000541363 TMEM105Q8N8V8 129 aa12.15□□□□□ -0.47
HMGA2-210ENST00000541363 Q71RC1 249 aaPredicted RBP12.14□□□□□ -0.47
HMGA2-210ENST00000541363 GREB1LQ9C091 1923 aaPredicted RBP12.14□□□□□ -0.47
HMGA2-210ENST00000541363 F8W735 103 aaPredicted RBP12.14□□□□□ -0.47
HMGA2-210ENST00000541363 V9GYY9 64 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 H3BUA1 57 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 NRXN2Q9P2S2 1712 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 UNQ6494/PRO21346Q6UXR6 183 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 ELANEP08246 267 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 TEN1Q86WV5 123 aa12.14□□□□□ -0.47
HMGA2-210ENST00000541363 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 QRFPP83859 136 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 CXCL5P42830 114 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 PRR20EP86478 221 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 PRR20CP86479 221 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 PRR20DP86480 221 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 PRR20BP86481 221 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 PRR20AP86496 221 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 PCP2Q8IVA1 136 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 UPK3BQ9BT76 320 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 LRRC37A2A6NM11 1700 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 LRRC37AA6NMS7 1700 aa12.13□□□□□ -0.47
HMGA2-210ENST00000541363 FXYD5Q96DB9 178 aa12.12□□□□□ -0.47
HMGA2-210ENST00000541363 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
HMGA2-210ENST00000541363 NDUFC2-KCTD14E9PQ53 114 aa12.12□□□□□ -0.47
HMGA2-210ENST00000541363 NPBQ8NG41 125 aa12.11□□□□□ -0.47
HMGA2-210ENST00000541363 TET1Q8NFU7 2136 aa12.11□□□□□ -0.47
HMGA2-210ENST00000541363 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
HMGA2-210ENST00000541363 FGF23Q9GZV9 251 aaPredicted RBP12.11□□□□□ -0.47
HMGA2-210ENST00000541363 PLXNB3Q9ULL4 1909 aa12.11□□□□□ -0.47
HMGA2-210ENST00000541363 A4D1N5 150 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 CSRP3P50461 194 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 MST1P26927 711 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 LMO1P25800 156 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 ARHGAP21Q5T5U3 1957 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 A0A0U1RQV1 116 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 GPHB5Q86YW7 130 aa12.1□□□□□ -0.47
HMGA2-210ENST00000541363 BPY2O14599 106 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 ZNF747Q9BV97 191 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 KIR2DL5BQ8NHK3 375 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 LENEPQ9Y5L5 61 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 LECT2O14960 151 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 CD59P13987 128 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 PIFOQ8TCI5 191 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 Q6ZUT4 128 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 Q8TCH9 128 aa12.09□□□□□ -0.47
HMGA2-210ENST00000541363 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
HMGA2-210ENST00000541363 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.47
HMGA2-210ENST00000541363 TRAV23DV6A0A075B6W5 121 aa12.08□□□□□ -0.48
HMGA2-210ENST00000541363 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
HMGA2-210ENST00000541363 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.48
HMGA2-210ENST00000541363 RLFQ13129 1914 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
HMGA2-210ENST00000541363 SERP1Q9Y6X1 66 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 HHLA3Q9XRX5 114 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 ANAPC1Q9H1A4 1944 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 FLVCR1-AS1Q8TAF5 88 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 COX7BP24311 80 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 ARTNQ5T4W7 220 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
HMGA2-210ENST00000541363 COL24A1Q17RW2 1714 aa12.07□□□□□ -0.48
HMGA2-210ENST00000541363 DENND4CQ5VZ89 1909 aa12.06□□□□□ -0.48
HMGA2-210ENST00000541363 C17orf58Q2M2W7 97 aa12.06□□□□□ -0.48
HMGA2-210ENST00000541363 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
HMGA2-210ENST00000541363 FOXI1Q12951 378 aa12.06□□□□□ -0.48
HMGA2-210ENST00000541363 FAM120AOSQ5T036 256 aa12.06□□□□□ -0.48
HMGA2-210ENST00000541363 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 GP9P14770 177 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 MLST8Q9BVC4 326 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 ASPHD1Q5U4P2 390 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 FAM236DA0A1B0GTK5 79 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 FAM236CP0DP71 79 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.05□□□□□ -0.486e-13■□□□□ 10.5
HMGA2-210ENST00000541363 APRG1Q8IVJ8 170 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 DAND5Q8N907 189 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 CLEC2BQ92478 149 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 VPREB3Q9UKI3 123 aa12.05□□□□□ -0.48
HMGA2-210ENST00000541363 RNF138Q8WVD3 245 aa12.04□□□□□ -0.48
HMGA2-210ENST00000541363 TCF20Q9UGU0 1960 aaKnown RBP12.04□□□□□ -0.48
HMGA2-210ENST00000541363 ZNF726P1Q15940 193 aa12.04□□□□□ -0.48
HMGA2-210ENST00000541363 H3BT86 120 aa12.04□□□□□ -0.48
HMGA2-210ENST00000541363 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
HMGA2-210ENST00000541363 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
HMGA2-210ENST00000541363 PLCE1Q9P212 2302 aa12.03□□□□□ -0.48
HMGA2-210ENST00000541363 USF3Q68DE3 2245 aa12.03□□□□□ -0.48
HMGA2-210ENST00000541363 COL18A1P39060 1754 aa12.03□□□□□ -0.48
HMGA2-210ENST00000541363 IGHV2-5P01817 119 aa12.02□□□□□ -0.48
HMGA2-210ENST00000541363 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.48
HMGA2-210ENST00000541363 WISP1O95388 367 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms