RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TOR2AQ5JU69 321 aa7.14□□□□□ -1.27
CDCA3-208ENST00000540683 DPPA3Q6W0C5 159 aa7.14□□□□□ -1.27
CDCA3-208ENST00000540683 KANTRA0A1W2PQU2 76 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 MAP1LC3B2A6NCE7 125 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 GGTLC3B5MD39 225 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 TEX46H3BTG2 121 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 RHODO00212 210 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 PEX7O00628 323 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 PFDN1O60925 122 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 SFTA3P0C7M3 94 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 SEC11BP0C7V7 166 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 FGF8P55075 233 aaPredicted RBP7.13□□□□□ -1.27
CDCA3-208ENST00000540683 LINC00315P59091 139 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 LGALSLQ3ZCW2 172 aaPredicted RBP7.13□□□□□ -1.27
CDCA3-208ENST00000540683 EIF5AL1Q6IS14 154 aaKnown RBP7.13□□□□□ -1.27
CDCA3-208ENST00000540683 ZFP2Q6ZN57 461 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 MAP1LC3BQ9GZQ8 125 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 MSRB1Q9NZV6 116 aa7.13□□□□□ -1.27
CDCA3-208ENST00000540683 PKHD1P08F94 4074 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 A0A087WWC5 75 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 HMSDA8MTL9 139 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 RS1O15537 224 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 DNAH10OSP0CZ25 163 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
CDCA3-208ENST00000540683 FAM162BQ5T6X4 162 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 Q6ZQT7 251 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 TVP23CQ96ET8 276 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 IL36BQ9NZH7 164 aa7.12□□□□□ -1.27
CDCA3-208ENST00000540683 IGHV3-38A0A0C4DH36 116 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 TRBV6-1A0A0K0K1D8 114 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 FAM74A7A6NL05 159 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 B4DEV8 164 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
CDCA3-208ENST00000540683 IGLV2-11P01706 119 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 CRYGDP07320 174 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 UBE2G2P60604 165 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 Q5BKY6 102 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 CT83Q5H943 113 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 CST9LP1Q5W188 147 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 COX8CQ7Z4L0 72 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 SPATA12Q7Z6I5 190 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
CDCA3-208ENST00000540683 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.11□□□□□ -1.27
CDCA3-208ENST00000540683 PSCAO43653 123 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 AKR1C3P42330 323 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 DNLZQ5SXM8 178 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 Q86TA4 180 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 SLC25A29Q8N8R3 303 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 OR11H4Q8NGC9 324 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 SGK494Q96LW2 274 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 GTSF1LQ9H1H1 148 aa7.1□□□□□ -1.27
CDCA3-208ENST00000540683 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 DNAH17Q9UFH2 4485 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 TPT1P13693 172 aaKnown RBP7.09□□□□□ -1.27
CDCA3-208ENST00000540683 RAB5CP51148 216 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 ZNF80P51504 273 aaPredicted RBP7.09□□□□□ -1.27
CDCA3-208ENST00000540683 LAGE3Q14657 143 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 LINC01556Q5JQF7 62 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 ZNF506Q5JVG8 444 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 LELP1Q5T871 98 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 KCNIP4Q6PIL6 250 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 ATP6V0E2Q8NHE4 81 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 TM2D2Q9BX73 214 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 ZNF471Q9BX82 626 aaPredicted RBP7.09□□□□□ -1.27
CDCA3-208ENST00000540683 KRTAP1-5Q9BYS1 174 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 PHLDA3Q9Y5J5 127 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 COX11Q9Y6N1 276 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 DNAH2Q9P225 4427 aa7.09□□□□□ -1.27
CDCA3-208ENST00000540683 HERC2O95714 4834 aa7.08□□□□□ -1.28
CDCA3-208ENST00000540683 BCL2L11O43521 198 aa7.08□□□□□ -1.28
CDCA3-208ENST00000540683 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
CDCA3-208ENST00000540683 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
CDCA3-208ENST00000540683 ZFP82Q8N141 532 aa7.08□□□□□ -1.28
CDCA3-208ENST00000540683 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
CDCA3-208ENST00000540683 SSBP4Q9BWG4 385 aaPredicted RBP7.08□□□□□ -1.28
CDCA3-208ENST00000540683 URGCP-MRPS24S4R325 110 aa7.08□□□□□ -1.28
CDCA3-208ENST00000540683 TRAV34A0A0B4J273 112 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 LTAP01374 205 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 H2AFB1P0C5Y9 115 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 LCE2AQ5TA79 106 aaPredicted RBP7.07□□□□□ -1.28
CDCA3-208ENST00000540683 WFDC10BQ8IUB3 73 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 FAM213BQ8TBF2 198 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 MBD3L1Q8WWY6 194 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 RMI2Q96E14 147 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 CYTL1Q9NRR1 136 aa7.07□□□□□ -1.28
CDCA3-208ENST00000540683 PKD1P98161 4303 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 KIAA1109Q2LD37 5005 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 TRAV8-3A0A0A6YYJ7 113 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 TRBV10-1A0A0K0K1A3 114 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 PGPEP1LA6NFU8 196 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 IBA57-AS1B1ANH7 110 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 KRBOX1C9JBD0 128 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 CXCL1P09341 107 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 PKIAP61925 76 aa7.06□□□□□ -1.28
CDCA3-208ENST00000540683 ELOBQ15370 118 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms