RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MAP1LC3B2A6NCE7 125 aa14.22□□□□□ -0.13
CHFR-217ENST00000540537 PGPEP1LA6NFU8 196 aa14.22□□□□□ -0.13
CHFR-217ENST00000540537 ERVFC1-1P60608 527 aa14.22□□□□□ -0.13
CHFR-217ENST00000540537 RHOHQ15669 191 aa14.22□□□□□ -0.13
CHFR-217ENST00000540537 Q86TA4 180 aa14.22□□□□□ -0.13
CHFR-217ENST00000540537 MAP1LC3BQ9GZQ8 125 aa14.22□□□□□ -0.13
CHFR-217ENST00000540537 IGKV3D-20A0A0C4DH25 116 aa14.21□□□□□ -0.13
CHFR-217ENST00000540537 FABP5P3A8MUU1 101 aa14.21□□□□□ -0.13
CHFR-217ENST00000540537 EREGO14944 169 aa14.21□□□□□ -0.13
CHFR-217ENST00000540537 MSRB1Q9NZV6 116 aa14.21□□□□□ -0.13
CHFR-217ENST00000540537 PIK3CD-AS1Q5SR53 167 aa14.2□□□□□ -0.14
CHFR-217ENST00000540537 C10orf126Q8N4M7 172 aa14.2□□□□□ -0.14
CHFR-217ENST00000540537 IGHV3-73A0A0B4J1V6 119 aa14.19□□□□□ -0.14
CHFR-217ENST00000540537 MGST1P10620 155 aaKnown RBP14.19□□□□□ -0.14
CHFR-217ENST00000540537 S100A4P26447 101 aaKnown RBP14.19□□□□□ -0.14
CHFR-217ENST00000540537 ASIPP42127 132 aa14.19□□□□□ -0.14
CHFR-217ENST00000540537 COX8CQ7Z4L0 72 aa14.19□□□□□ -0.14
CHFR-217ENST00000540537 SMLR1H3BR10 107 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 CRYGDP07320 174 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 FHITP49789 147 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 ZNF345Q14585 488 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 KCNRGQ8N5I3 272 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 STOML3Q8TAV4 291 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 FMC1Q96HJ9 113 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 TCEAL7Q9BRU2 100 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 KRTAP4-5Q9BYR2 181 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 PGPEP1Q9NXJ5 209 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 ZFP30Q9Y2G7 519 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 BOLA1Q9Y3E2 137 aa14.18□□□□□ -0.14
CHFR-217ENST00000540537 IGHV3-38A0A0C4DH36 116 aa14.17□□□□□ -0.14
CHFR-217ENST00000540537 A8MWV9 139 aa14.17□□□□□ -0.14
CHFR-217ENST00000540537 LINC01556Q5JQF7 62 aa14.17□□□□□ -0.14
CHFR-217ENST00000540537 ZFP2Q6ZN57 461 aa14.17□□□□□ -0.14
CHFR-217ENST00000540537 MAPKAPK5-AS1Q8N8E1 139 aa14.17□□□□□ -0.14
CHFR-217ENST00000540537 IL36BQ9NZH7 164 aa14.17□□□□□ -0.14
CHFR-217ENST00000540537 B4DEV8 164 aa14.16□□□□□ -0.14
CHFR-217ENST00000540537 DNLZQ5SXM8 178 aa14.16□□□□□ -0.14
CHFR-217ENST00000540537 CDPF1Q6NVV7 123 aa14.16□□□□□ -0.14
CHFR-217ENST00000540537 ZC2HC1AQ96GY0 325 aa14.16□□□□□ -0.14
CHFR-217ENST00000540537 PARLQ9H300 379 aa14.16□□□□□ -0.14
CHFR-217ENST00000540537 A0A087WTM6 91 aa14.15□□□□□ -0.14
CHFR-217ENST00000540537 TRAV8-6A0A0B4J262 113 aa14.15□□□□□ -0.14
CHFR-217ENST00000540537 TRBV6-1A0A0K0K1D8 114 aa14.15□□□□□ -0.14
CHFR-217ENST00000540537 CRIP1P50238 77 aa14.15□□□□□ -0.14
CHFR-217ENST00000540537 UBE2G1P62253 170 aa14.15□□□□□ -0.14
CHFR-217ENST00000540537 HMSDA8MTL9 139 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 KRBOX1C9JBD0 128 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 SEC11BP0C7V7 166 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 LGALSLQ3ZCW2 172 aaPredicted RBP14.14□□□□□ -0.15
CHFR-217ENST00000540537 OR10J3Q5JRS4 329 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 FAM162BQ5T6X4 162 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 LELP1Q5T871 98 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 CST9LP1Q5W188 147 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 GTSF1LQ9H1H1 148 aa14.14□□□□□ -0.15
CHFR-217ENST00000540537 SH2D1AO60880 128 aa14.13□□□□□ -0.15
CHFR-217ENST00000540537 ATP6V0E2Q8NHE4 81 aa14.13□□□□□ -0.15
CHFR-217ENST00000540537 UMAD1C9J7I0 102 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 H3BVH4 76 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 LTAP01374 205 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 ZNF674Q2M3X9 581 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 UFSP1Q6NVU6 142 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 Q6ZSN1 163 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 Q8N1X5 172 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 SYT8Q8NBV8 401 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 OR11H4Q8NGC9 324 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 MBD3L1Q8WWY6 194 aa14.12□□□□□ -0.15
CHFR-217ENST00000540537 A0A0D9SG52 128 aa14.11□□□□□ -0.15
CHFR-217ENST00000540537 M0R036 132 aa14.11□□□□□ -0.15
CHFR-217ENST00000540537 ARMS2P0C7Q2 107 aa14.11□□□□□ -0.15
CHFR-217ENST00000540537 LINC00694P0DN24 101 aa14.11□□□□□ -0.15
CHFR-217ENST00000540537 AKR1C3P42330 323 aa14.11□□□□□ -0.15
CHFR-217ENST00000540537 IBA57-AS1B1ANH7 110 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 RHODO00212 210 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 BCL2L11O43521 198 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 PAGE4O60829 102 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 LINC01559Q495D7 138 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 DMRTA1Q5VZB9 504 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 FAM213BQ8TBF2 198 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 SFT2D1Q8WV19 159 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 ZNF471Q9BX82 626 aaPredicted RBP14.1□□□□□ -0.15
CHFR-217ENST00000540537 JPT2Q9H910 190 aa14.1□□□□□ -0.15
CHFR-217ENST00000540537 KANTRA0A1W2PQU2 76 aa14.09□□□□□ -0.15
CHFR-217ENST00000540537 GRIFINA4D1Z8 144 aa14.09□□□□□ -0.15
CHFR-217ENST00000540537 FUSP35637 526 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHFR-217ENST00000540537 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
CHFR-217ENST00000540537 SCRT2Q9NQ03 307 aa14.09□□□□□ -0.15
CHFR-217ENST00000540537 GAGE12JA6NER3 117 aa14.08□□□□□ -0.16
CHFR-217ENST00000540537 GAGE1Q13065 139 aa14.08□□□□□ -0.16
CHFR-217ENST00000540537 GAGE4Q13068 117 aa14.08□□□□□ -0.16
CHFR-217ENST00000540537 GAGE5Q13069 117 aa14.08□□□□□ -0.16
CHFR-217ENST00000540537 GAGE13Q4V321 117 aa14.08□□□□□ -0.16
CHFR-217ENST00000540537 S100A9P06702 114 aaKnown RBP14.07□□□□□ -0.16
CHFR-217ENST00000540537 TPT1P13693 172 aaKnown RBP14.07□□□□□ -0.16
CHFR-217ENST00000540537 EIF5AP63241 154 aaKnown RBP14.07□□□□□ -0.16
CHFR-217ENST00000540537 PHLDA3Q9Y5J5 127 aa14.07□□□□□ -0.16
CHFR-217ENST00000540537 PSCAO43653 123 aa14.06□□□□□ -0.16
CHFR-217ENST00000540537 PFDN1O60925 122 aa14.06□□□□□ -0.16
CHFR-217ENST00000540537 IGHV3-30P01768 117 aa14.06□□□□□ -0.16
CHFR-217ENST00000540537 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
CHFR-217ENST00000540537 IGHV3-30-3P0DP02 117 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms