RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 JPT2Q9H910 190 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 MRPL35Q9NZE8 188 aaKnown RBP8.66□□□□□ -1.02
C11orf54-214ENST00000540113 PEF1Q9UBV8 284 aaKnown RBP8.66□□□□□ -1.02
C11orf54-214ENST00000540113 SMPXQ9UHP9 88 aa8.66□□□□□ -1.02
C11orf54-214ENST00000540113 K7EMI3 77 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 IGKCP01834 107 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 RNASE3P12724 160 aaKnown RBP8.65□□□□□ -1.02
C11orf54-214ENST00000540113 PLA2G2AP14555 144 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 CFAP161Q6P656 301 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 ADAMTSL5Q6ZMM2 481 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 MXRA5Q9NR99 2828 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 A0A0G2JLM5 398 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 TGFAP01135 160 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 ZMAT4Q9H898 229 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 AGRNO00468 2067 aa8.65□□□□□ -1.02
C11orf54-214ENST00000540113 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 J3QKU1 62 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 MYOZ3Q8TDC0 251 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 ZNF580Q9UK33 172 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 SORL1Q92673 2214 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 TRAV12-3A0A0B4J271 114 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 ZNF688P0C7X2 276 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 PSMB8P28062 276 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
C11orf54-214ENST00000540113 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 J3QLI3 93 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 FSHBP01225 129 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 DPM2O94777 84 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 DCANP1Q8TF63 244 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 JMJD8Q96S16 334 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
C11orf54-214ENST00000540113 BEX4Q9NWD9 120 aaPredicted RBP8.63□□□□□ -1.03
C11orf54-214ENST00000540113 PTPN13Q12923 2485 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 A0A087WWL8 130 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 IGHV4-31P0DP07 118 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
C11orf54-214ENST00000540113 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 MAPKAPK5-AS1Q8N8E1 139 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 OR9G4Q8NGQ1 327 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 H3BUT2 72 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 ATP5LO75964 103 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 HSD52Q0P140 79 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 EPG5Q9HCE0 2579 aa8.62□□□□□ -1.03
C11orf54-214ENST00000540113 GCSHP23434 173 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 SYNJ2BPP57105 145 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 SEC11AP67812 179 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 LRRC75A-AS1Q8N1F1 130 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 ABCA12Q86UK0 2595 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 CD7P09564 240 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 SCGB3A1Q96QR1 104 aa8.61□□□□□ -1.03
C11orf54-214ENST00000540113 A0A087WX48 190 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-214ENST00000540113 K7EMT4 169 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 FXYD2P54710 66 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 FAM159AQ6UWV7 190 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 TEX15Q9BXT5 2789 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 KMT2BQ9UMN6 2715 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-214ENST00000540113 TRBV25-1A0A075B6N4 114 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 K7ERJ3 54 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 DEFB113Q30KQ7 82 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 CSTL1Q9H114 145 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 VPREB3Q9UKI3 123 aa8.6□□□□□ -1.03
C11orf54-214ENST00000540113 IGHV4OR15-8A0A075B7B6 117 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 A0A087WW49 117 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 A6NDN8 102 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 KLLNB2CW77 178 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 SIVA1O15304 175 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 ID1P41134 155 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 FAM74A4Q5TZK3 123 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 ZNF702PQ9H963 129 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 F5H697 171 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 RNF151Q2KHN1 245 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 DEFB136Q30KP8 78 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 Q5PR19 223 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 Q6YL49 198 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 MDFICQ9P1T7 246 aa8.59□□□□□ -1.03
C11orf54-214ENST00000540113 C9orf118A6NHY6 69 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 H3BRM9 83 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 LINC00315P59091 139 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 SPINK13Q1W4C9 94 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 KIF25-AS1Q9Y6Z4 181 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
C11orf54-214ENST00000540113 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 EMP1P54849 157 aa8.58□□□□□ -1.04
C11orf54-214ENST00000540113 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
C11orf54-214ENST00000540113 HOXA3O43365 443 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-214ENST00000540113 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
C11orf54-214ENST00000540113 RBX1P62877 108 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms