RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PTPRQQ9UMZ3 2332 aa10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 S100A4P26447 101 aaKnown RBP10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 CDIP1Q9H305 208 aa10.56□□□□□ -0.72
SCNN1A-215ENST00000540037 A0A1B0GV72 72 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 CRYGDP07320 174 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 AJUBAQ96IF1 538 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 MUC4Q99102 2169 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 ORMDL2Q53FV1 153 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 TMEM219Q86XT9 240 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 Q6ZS46 218 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 ZFAND2AQ8N6M9 145 aa10.55□□□□□ -0.72
SCNN1A-215ENST00000540037 COL6A6A6NMZ7 2263 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 TRBV12-3P01733 135 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 MT-ATP8P03928 68 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 COX6B1P14854 86 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 UNQ9165/PRO28630Q6UXU0 137 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 JPT2Q9H910 190 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 C11orf86A6NJI1 115 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 GPHB5Q86YW7 130 aa10.54□□□□□ -0.72
SCNN1A-215ENST00000540037 CCL21O00585 134 aa10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 TSHBP01222 138 aa10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 RNASE4P34096 147 aaKnown RBP10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 RPL39P62891 51 aaKnown RBP10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 DLX4Q92988 240 aaPredicted RBP10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 SAA4P35542 130 aa10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 ARL3P36405 182 aa10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 DPH3P1Q9H4G8 78 aa10.53□□□□□ -0.72
SCNN1A-215ENST00000540037 UBE2D1P51668 147 aa10.52□□□□□ -0.72
SCNN1A-215ENST00000540037 TSPEAR-AS2P59090 65 aa10.52□□□□□ -0.72
SCNN1A-215ENST00000540037 CARD19Q96LW7 228 aa10.52□□□□□ -0.72
SCNN1A-215ENST00000540037 CRYBG3Q68DQ2 2970 aa10.52□□□□□ -0.72
SCNN1A-215ENST00000540037 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 CD7P09564 240 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 EEF1AKMT3Q96AZ1 226 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 SIRPDQ9H106 197 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 IGHV3OR16-10A0A075B7F0 116 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 LINC01619G3V211 115 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 ITLN2Q8WWU7 325 aaPredicted RBP10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 U3KQE9 123 aa10.52□□□□□ -0.73
SCNN1A-215ENST00000540037 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 XGP55808 180 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 RPL11P62913 178 aaKnown RBP10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 MINOS1Q5TGZ0 78 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 MINOS1-NBL1R4GNA1 71 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 TCL1BO95988 128 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 SPINK8P0C7L1 97 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 TP53TG1Q9Y2A0 90 aa10.51□□□□□ -0.73
SCNN1A-215ENST00000540037 ASIPP42127 132 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 MRPL53Q96EL3 112 aaKnown RBP10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 A0A1W2PPR1 153 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 A0A0J9YY99 117 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 OOSP1A8MZH6 123 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 SRD5A1P18405 259 aa10.5□□□□□ -0.73
SCNN1A-215ENST00000540037 IGF2RP11717 2491 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 UBE2D3P61077 147 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 UBE2D2P62837 147 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 C11orf71Q6IPW1 123 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 GEMIN7Q9H840 131 aaKnown RBP10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 A0A087WWL8 130 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 C1orf122Q6ZSJ8 110 aa10.49□□□□□ -0.73
SCNN1A-215ENST00000540037 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 CFC1P0CG37 223 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 CENPVL3A0A0U1RRI6 287 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 IGHV3-11P01762 117 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 TMEM170BQ5T4T1 132 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
SCNN1A-215ENST00000540037 EDN2P20800 178 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 CRYBA4P53673 196 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 Q6ZUT4 128 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 ZNRF2Q8NHG8 242 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 C9orf139Q6ZV77 190 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 LINC00315P59091 139 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 C5orf56Q8N8D9 126 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 RAX2Q96IS3 184 aa10.47□□□□□ -0.73
SCNN1A-215ENST00000540037 IGIPA6NJ69 53 aa10.46□□□□□ -0.73
SCNN1A-215ENST00000540037 LINC00477Q96M19 166 aa10.46□□□□□ -0.73
SCNN1A-215ENST00000540037 MUC6Q6W4X9 2439 aa10.46□□□□□ -0.73
SCNN1A-215ENST00000540037 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 SOCS3O14543 225 aa10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 IGHV3-30P01768 117 aa10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 IGHV3-30-5P0DP03 117 aa10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 GATA3P23771 443 aa10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 UBE2E1P51965 193 aa10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 CRIP2P52943 208 aaPredicted RBP10.46□□□□□ -0.74
SCNN1A-215ENST00000540037 H7C2G1 150 aa10.45□□□□□ -0.74
SCNN1A-215ENST00000540037 EIF4EBP3O60516 100 aaPredicted RBP10.45□□□□□ -0.74
SCNN1A-215ENST00000540037 ADORA2A-AS1P86434 159 aa10.45□□□□□ -0.74
SCNN1A-215ENST00000540037 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms