RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 MUC21A0A0G2JKD1 596 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 MUC21A0A140T8X8 626 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 C7orf77A4D0Y5 90 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 SNAI2O43623 268 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 MED14OSP0DP75 135 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 SPINK4O60575 86 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 OR5AL1P0C617 328 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 RHEBQ15382 184 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 Q6ZTI0 123 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 OR10AG1Q8NH19 301 aa16.78■□□□□ 0.28
TMEM260-202ENST00000538838 SSBP4Q9BWG4 385 aaPredicted RBP16.78■□□□□ 0.28
TMEM260-202ENST00000538838 TGP01266 2768 aa16.77■□□□□ 0.28
TMEM260-202ENST00000538838 TRGV1A0A0A0MS02 117 aa16.77■□□□□ 0.27
TMEM260-202ENST00000538838 M0R2P5 195 aa16.77■□□□□ 0.27
TMEM260-202ENST00000538838 SNAPINO95295 136 aa16.77■□□□□ 0.27
TMEM260-202ENST00000538838 PHLDA3Q9Y5J5 127 aa16.77■□□□□ 0.27
TMEM260-202ENST00000538838 A0A1W2PPQ1 181 aa16.76■□□□□ 0.27
TMEM260-202ENST00000538838 LYRM9A8MSI8 78 aa16.76■□□□□ 0.27
TMEM260-202ENST00000538838 LYZL1Q6UWQ5 148 aa16.76■□□□□ 0.27
TMEM260-202ENST00000538838 GFRA4Q9GZZ7 299 aa16.76■□□□□ 0.27
TMEM260-202ENST00000538838 RPS10P5Q9NQ39 176 aa16.76■□□□□ 0.27
TMEM260-202ENST00000538838 HIGD1CA8MV81 97 aa16.75■□□□□ 0.27
TMEM260-202ENST00000538838 CTRLP40313 264 aa16.75■□□□□ 0.27
TMEM260-202ENST00000538838 PGLYRP4Q96LB8 373 aa16.75■□□□□ 0.27
TMEM260-202ENST00000538838 SMIM27A0A1W2PRY6 76 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 GAGE12BA1L429 117 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 M0R381 172 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 GAGE7O76087 117 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 GAGE12FP0CL80 117 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 GAGE12GP0CL81 117 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 GAGE12IP0CL82 117 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 SPART-AS1P0CW21 52 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 SSTP61278 116 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 DEFB130BP0DP73 79 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 DEFB130AP0DP74 79 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 ZNF876PQ49A33 203 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 CTDSP1Q9GZU7 261 aa16.74■□□□□ 0.27
TMEM260-202ENST00000538838 FAM231BA6NCW3 169 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 CXorf65A6NEN9 183 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 ATP6V1G1O75348 118 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 LGALS9BQ3B8N2 356 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 DMRTA1Q5VZB9 504 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 ATRAIDQ6UW56 229 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 EDA2RQ9HAV5 297 aa16.73■□□□□ 0.27
TMEM260-202ENST00000538838 A0A087WWC5 75 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 F2Z2F3 143 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 FOXA3P55318 350 aaPredicted RBP16.72■□□□□ 0.27
TMEM260-202ENST00000538838 SPANXN1Q5VSR9 72 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 ZFP82Q8N141 532 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 LINC00612Q8N6U2 182 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 NUP35Q8NFH5 326 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 RASL10AQ92737 203 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 NAT8BQ9UHF3 227 aa16.72■□□□□ 0.27
TMEM260-202ENST00000538838 TEX48A0A1B0GUV7 120 aa16.71■□□□□ 0.27
TMEM260-202ENST00000538838 NXPH4O95158 308 aa16.71■□□□□ 0.27
TMEM260-202ENST00000538838 SYT8Q8NBV8 401 aa16.71■□□□□ 0.27
TMEM260-202ENST00000538838 NACAE9PAV3 2078 aa16.71■□□□□ 0.26
TMEM260-202ENST00000538838 DAD1P61803 113 aa16.7■□□□□ 0.26
TMEM260-202ENST00000538838 C11orf45Q8TAV5 145 aa16.7■□□□□ 0.26
TMEM260-202ENST00000538838 PTH2Q96A98 100 aa16.7■□□□□ 0.26
TMEM260-202ENST00000538838 C12orf74Q32Q52 190 aa16.7■□□□□ 0.26
TMEM260-202ENST00000538838 CNFNQ9BYD5 112 aa16.7■□□□□ 0.26
TMEM260-202ENST00000538838 FAM3BP58499 235 aaPredicted RBP16.69■□□□□ 0.26
TMEM260-202ENST00000538838 NANOS2P60321 138 aaKnown RBP16.69■□□□□ 0.26
TMEM260-202ENST00000538838 MSRB1Q9NZV6 116 aa16.69■□□□□ 0.26
TMEM260-202ENST00000538838 TRGV2A0A075B6R0 118 aa16.68■□□□□ 0.26
TMEM260-202ENST00000538838 CACNG7P62955 275 aa16.68■□□□□ 0.26
TMEM260-202ENST00000538838 JPT2Q9H910 190 aa16.68■□□□□ 0.26
TMEM260-202ENST00000538838 TMEM242Q9NWH2 141 aa16.68■□□□□ 0.26
TMEM260-202ENST00000538838 NTF3P20783 257 aa16.67■□□□□ 0.26
TMEM260-202ENST00000538838 IGHV4-4A0A075B6R2 117 aa16.67■□□□□ 0.26
TMEM260-202ENST00000538838 BORCS7Q96B45 105 aa16.67■□□□□ 0.26
TMEM260-202ENST00000538838 A0A1B0GUT8 65 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 IGHV3-53P01767 116 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 TWIST1Q15672 202 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 PIK3CD-AS1Q5SR53 167 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 WDR73Q6P4I2 378 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 Q6ZTC4 211 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 POM121L12Q8N7R1 296 aa16.66■□□□□ 0.26
TMEM260-202ENST00000538838 IMMP2LQ96T52 175 aa16.65■□□□□ 0.26
TMEM260-202ENST00000538838 NDUFAF3Q9BU61 184 aa16.65■□□□□ 0.26
TMEM260-202ENST00000538838 URGCP-MRPS24S4R325 110 aa16.65■□□□□ 0.26
TMEM260-202ENST00000538838 CFAP126Q5VTH2 177 aa16.64■□□□□ 0.25
TMEM260-202ENST00000538838 C18orf15Q96N68 181 aa16.64■□□□□ 0.25
TMEM260-202ENST00000538838 RS1O15537 224 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 MRPL54Q6P161 138 aaKnown RBP16.63■□□□□ 0.25
TMEM260-202ENST00000538838 KCNIP4Q6PIL6 250 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 SAMD10Q9BYL1 202 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 TRAV4A0A0B4J268 109 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 A8MWV9 139 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 OR4C5Q8NGB2 326 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 ZNF479Q96JC4 524 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 AP1S3Q96PC3 154 aa16.63■□□□□ 0.25
TMEM260-202ENST00000538838 A0A087WWL8 130 aa16.62■□□□□ 0.25
TMEM260-202ENST00000538838 S100A1P23297 94 aa16.62■□□□□ 0.25
TMEM260-202ENST00000538838 S100PP25815 95 aa16.62■□□□□ 0.25
TMEM260-202ENST00000538838 HTN3P15516 51 aa16.61■□□□□ 0.25
TMEM260-202ENST00000538838 RIGQ13278 110 aa16.61■□□□□ 0.25
TMEM260-202ENST00000538838 FAM74A4Q5TZK3 123 aa16.61■□□□□ 0.25
TMEM260-202ENST00000538838 C14orf178Q8N769 122 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 278.8 ms