RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 LSM5Q9Y4Y9 91 aaKnown RBP3.53□□□□□ -1.84
SNHG1-207ENST00000537965 UBE2L5PA0A1B0GUS4 154 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 TRBV6-4A0A1B0GX49 114 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 C5orf51A6NDU8 294 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 FBLL1A6NHQ2 334 aaKnown RBP3.52□□□□□ -1.85
SNHG1-207ENST00000537965 FAM25EA8MYX2 175 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 GGTLC3B5MD39 225 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 RS1O15537 224 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 PYYP10082 97 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 GATA1P15976 413 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-207ENST00000537965 MT3P25713 68 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 RHOHQ15669 191 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 ARL6IP6Q8N6S5 226 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 Q8N976 141 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 ATP6V0E2Q8NHE4 81 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 CMTM2Q8TAZ6 248 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 PAXXQ9BUH6 204 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 GTSF1LQ9H1H1 148 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 SDF2L1Q9HCN8 221 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 LYRM2Q9NU23 88 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-207ENST00000537965 FLVCR2Q9UPI3 526 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 V9GYH0 126 aa3.52□□□□□ -1.85
SNHG1-207ENST00000537965 A0A087WWC5 75 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 TRAV8-1A0A0A6YYK1 113 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 TRAV21A0A0B4J279 112 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 A0A1B0GUV1 79 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 RBFOX3A6NFN3 312 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 FAM24AA6NFZ4 105 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 IFITM10A6NMD0 228 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 C17orf112F2Z3M2 114 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 H3BMQ9 156 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 OR7C2O60412 319 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 IGHV3-30P01768 117 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 IGHV3-33P01772 117 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 IGHV3-30-5P0DP03 117 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 MGST1P10620 155 aaKnown RBP3.51□□□□□ -1.85
SNHG1-207ENST00000537965 TAS2R45P59539 299 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 RANP62826 216 aaKnown RBP3.51□□□□□ -1.85
SNHG1-207ENST00000537965 RPL36AP83881 106 aaKnown RBP3.51□□□□□ -1.85
SNHG1-207ENST00000537965 C14orf177Q52M58 125 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 PRR9Q5T870 116 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 TMEM252Q8N6L7 170 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 NEXN-AS1Q8NBZ9 246 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 TMEM18Q96B42 140 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 C2orf50Q96LR7 162 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 CHAC1Q9BUX1 264 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 SLC25A2Q9BXI2 301 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 NPCDR1Q9BY65 106 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 NAGKQ9UJ70 344 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 URGCP-MRPS24S4R325 110 aa3.51□□□□□ -1.85
SNHG1-207ENST00000537965 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-207ENST00000537965 IGHV3-16A0A0C4DH30 117 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 GNRH2O43555 120 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 IGLV2-8P01709 118 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 OR10J4P0C629 311 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 FGF8P55075 233 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-207ENST00000537965 S100A10P60903 97 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 ELOBQ15370 118 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 ZNF876PQ49A33 203 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 KHDC3LQ587J8 217 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 PQLC2Q6ZP29 291 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 Q6ZQT7 251 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 MIR17HGQ75NE6 70 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 SLC25A29Q8N8R3 303 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 OR10G9Q8NGN4 311 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 Q8TAT8 98 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 ASB13Q8WXK3 278 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 PTH2Q96A98 100 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 FXYD5Q96DB9 178 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 FAM167A-AS1Q96KT0 104 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 NDFIP1Q9BT67 221 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 NMES1Q9C002 83 aa3.5□□□□□ -1.85
SNHG1-207ENST00000537965 SERTM2A0A1B0GWG4 89 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 RNF222A6NCQ9 220 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 CCDC160A6NGH7 325 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 K7EQM0 130 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 VCYO14598 125 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 CCSO14618 274 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 TAAR5O14804 337 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 IGLV2-11P01706 119 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 TYMSP04818 313 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
SNHG1-207ENST00000537965 UBE2L3P68036 154 aaKnown RBP3.49□□□□□ -1.85
SNHG1-207ENST00000537965 Q0VG73 95 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 CFAP126Q5VTH2 177 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 KCNIP4Q6PIL6 250 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 SCXQ7RTU7 201 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 BAALCQ8WXS3 180 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 PHYHIPLQ96FC7 376 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 HYLS1Q96M11 299 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 C11orf1Q9H5F2 150 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 TREM1Q9NP99 234 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 OTORQ9NRC9 128 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 FAT1Q14517 4588 aa3.49□□□□□ -1.85
SNHG1-207ENST00000537965 IGKV2D-24A0A075B6R9 120 aa3.48□□□□□ -1.85
SNHG1-207ENST00000537965 A0A1W2PPV4 95 aa3.48□□□□□ -1.85
SNHG1-207ENST00000537965 IGSF23A1L1A6 192 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms