RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 ANAPC16Q96DE5 110 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 TM2D2Q9BX73 214 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 MRPL36Q9P0J6 103 aaKnown RBP6.1□□□□□ -1.43
USP28-205ENST00000537706 URGCP-MRPS24S4R325 110 aa6.1□□□□□ -1.43
USP28-205ENST00000537706 TRBV24-1A0A075B6N3 115 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 TRAV12-2A0A075B6T6 113 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 C9JCJ5 164 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 H7BYZ3 331 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 SOCS3O14543 225 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 OR7C2O60412 319 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 NDUFB4O95168 129 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 CXCL1P09341 107 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 RD3LP0DJH9 198 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 C1orf194Q5T5A4 169 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 C10orf113Q5VZT2 155 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 CIRBP-AS1Q8TBR5 109 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 DERL1Q9BUN8 251 aa6.09□□□□□ -1.43
USP28-205ENST00000537706 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 A0A1W2PRE2 83 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 TOMM40O96008 361 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 IGLC1P0CG04 106 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 CDKN1BP46527 198 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 RPS10P46783 165 aaKnown RBP6.09□□□□□ -1.44
USP28-205ENST00000537706 UBE2L3P68036 154 aaKnown RBP6.09□□□□□ -1.44
USP28-205ENST00000537706 ZNF90Q03938 601 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 SLAQ13239 276 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 DAZAP1Q96EP5 407 aaKnown RBP6.09□□□□□ -1.44
USP28-205ENST00000537706 FAM167A-AS1Q96KT0 104 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 SLC25A2Q9BXI2 301 aa6.09□□□□□ -1.44
USP28-205ENST00000537706 TRBV20OR9-2A0A075B6H5 130 aa6.08□□□□□ -1.44
USP28-205ENST00000537706 PPP1R2P9O14990 202 aa6.08□□□□□ -1.44
USP28-205ENST00000537706 S100PP25815 95 aa6.08□□□□□ -1.44
USP28-205ENST00000537706 PLP1P60201 277 aa6.08□□□□□ -1.44
USP28-205ENST00000537706 PYGO2Q9BRQ0 406 aa6.08□□□□□ -1.44
USP28-205ENST00000537706 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
USP28-205ENST00000537706 C5orf52A6NGY3 159 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 GGTLC3B5MD39 225 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 S100A6P06703 90 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 PFN1P07737 140 aaKnown RBP6.07□□□□□ -1.44
USP28-205ENST00000537706 GALR1P47211 349 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 HNRNPA3P51991 378 aaKnown RBP6.07□□□□□ -1.44
USP28-205ENST00000537706 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 PATE2Q6UY27 113 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 C20orf144Q9BQM9 153 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 TCEAL7Q9BRU2 100 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 FABP1P07148 127 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 OR10J4P0C629 311 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 RPL35P42766 123 aaKnown RBP6.07□□□□□ -1.44
USP28-205ENST00000537706 KCNIP4Q6PIL6 250 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 WFDC10BQ8IUB3 73 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 OR8I2Q8N0Y5 310 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 SFRP2Q96HF1 295 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 IMMP2LQ96T52 175 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 PAXXQ9BUH6 204 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 Q9HAA7 133 aa6.07□□□□□ -1.44
USP28-205ENST00000537706 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.06□□□□□ -1.44
USP28-205ENST00000537706 HYPMO75409 117 aa6.06□□□□□ -1.44
USP28-205ENST00000537706 ZNF324O75467 553 aaPredicted RBP6.06□□□□□ -1.44
USP28-205ENST00000537706 SRIP30626 198 aa6.06□□□□□ -1.44
USP28-205ENST00000537706 LINC00305Q7Z4B0 112 aa6.06□□□□□ -1.44
USP28-205ENST00000537706 FXYD5Q96DB9 178 aa6.06□□□□□ -1.44
USP28-205ENST00000537706 BTF3L4Q96K17 158 aa6.06□□□□□ -1.44
USP28-205ENST00000537706 SLC25A39Q9BZJ4 359 aaPredicted RBP6.06□□□□□ -1.44
USP28-205ENST00000537706 PGPEP1LA6NFU8 196 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 TYMSP04818 313 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 GNG4P50150 75 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 SNRPEP62304 92 aaKnown RBP6.05□□□□□ -1.44
USP28-205ENST00000537706 OR1B1Q8NGR6 318 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 C20orf173Q96LM9 149 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 OR51M1Q9H341 326 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 PRO0255Q9UI72 69 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 IBA57-AS1B1ANH7 110 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 PYYP10082 97 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 ORM2P19652 201 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 CENPWQ5EE01 88 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 OCC1Q8TAD7 63 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 HIGD1AQ9Y241 93 aa6.05□□□□□ -1.44
USP28-205ENST00000537706 TRAV9-1A0A075B6T8 112 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 K7EN84 100 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 PHOX2AO14813 284 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 TRGC2P03986 189 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 S100A8P05109 93 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 GYPEP15421 78 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 S100A7P31151 101 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 AKR1D1P51857 326 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 HIST1H1AQ02539 215 aaPredicted RBP6.04□□□□□ -1.44
USP28-205ENST00000537706 ZNF415Q09FC8 603 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 FABP9Q0Z7S8 132 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 DAZ2Q13117 558 aaKnown RBP6.04□□□□□ -1.44
USP28-205ENST00000537706 ODF1Q14990 250 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 ZNF738Q8NE65 137 aa6.04□□□□□ -1.44
USP28-205ENST00000537706 TNXBP22105 4242 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BKO60814 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BJP06899 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 PSG1P11464 419 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BOP23527 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BBP33778 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BDP58876 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 LYZP61626 148 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms