RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 SVBPQ8N300 66 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 FER1L6-AS1Q8NA97 138 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 CELA1Q9UNI1 258 aa17.31■□□□□ 0.36
HMGA2-208ENST00000537429 A0A1W2PPQ1 181 aa17.3■□□□□ 0.36
HMGA2-208ENST00000537429 M0R2P5 195 aa17.3■□□□□ 0.36
HMGA2-208ENST00000537429 GFRA4Q9GZZ7 299 aa17.3■□□□□ 0.36
HMGA2-208ENST00000537429 MUC4Q99102 2169 aa17.29■□□□□ 0.36
HMGA2-208ENST00000537429 FAM231BA6NCW3 169 aa17.29■□□□□ 0.36
HMGA2-208ENST00000537429 SPART-AS1P0CW21 52 aa17.29■□□□□ 0.36
HMGA2-208ENST00000537429 FOXA3P55318 350 aaPredicted RBP17.29■□□□□ 0.36
HMGA2-208ENST00000537429 LGALS9BQ3B8N2 356 aa17.29■□□□□ 0.36
HMGA2-208ENST00000537429 EDA2RQ9HAV5 297 aa17.29■□□□□ 0.36
HMGA2-208ENST00000537429 CXorf65A6NEN9 183 aa17.28■□□□□ 0.36
HMGA2-208ENST00000537429 Q6ZTI0 123 aa17.28■□□□□ 0.36
HMGA2-208ENST00000537429 PTH2Q96A98 100 aa17.28■□□□□ 0.36
HMGA2-208ENST00000537429 PHLDA3Q9Y5J5 127 aa17.28■□□□□ 0.36
HMGA2-208ENST00000537429 C7orf77A4D0Y5 90 aa17.27■□□□□ 0.36
HMGA2-208ENST00000537429 RHEBQ15382 184 aa17.27■□□□□ 0.36
HMGA2-208ENST00000537429 LINC00612Q8N6U2 182 aa17.27■□□□□ 0.36
HMGA2-208ENST00000537429 RASL10AQ92737 203 aa17.27■□□□□ 0.36
HMGA2-208ENST00000537429 TRGV1A0A0A0MS02 117 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 TEX48A0A1B0GUV7 120 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 SMIM27A0A1W2PRY6 76 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 F2Z2F3 143 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 SNAPINO95295 136 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 LYZL1Q6UWQ5 148 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 OR10AG1Q8NH19 301 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 TPPP3Q9BW30 176 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 CTDSP1Q9GZU7 261 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 MRPL16Q9NX20 251 aaKnown RBP17.26■□□□□ 0.35
HMGA2-208ENST00000537429 TGP01266 2768 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 HIGD1CA8MV81 97 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 DEFB130BP0DP73 79 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 DEFB130AP0DP74 79 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 CTRLP40313 264 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 ZNF876PQ49A33 203 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 C11orf45Q8TAV5 145 aa17.26■□□□□ 0.35
HMGA2-208ENST00000537429 DMRTA1Q5VZB9 504 aa17.25■□□□□ 0.35
HMGA2-208ENST00000537429 A0A087WWC5 75 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 GAGE12BA1L429 117 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 GAGE7O76087 117 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 GAGE12FP0CL80 117 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 GAGE12GP0CL81 117 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 GAGE12IP0CL82 117 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 PIK3CD-AS1Q5SR53 167 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 STAB2Q8WWQ8 2551 aa17.24■□□□□ 0.35
HMGA2-208ENST00000537429 MUC21A0A0G2JKD1 596 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 MUC21A0A140T8X8 626 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 DAD1P61803 113 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 ZFP82Q8N141 532 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 PGLYRP4Q96LB8 373 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 CNFNQ9BYD5 112 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 RPS10P5Q9NQ39 176 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 TMEM242Q9NWH2 141 aa17.23■□□□□ 0.35
HMGA2-208ENST00000537429 M0R381 172 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 NXPH4O95158 308 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 C12orf74Q32Q52 190 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 SPANXN1Q5VSR9 72 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 SYT8Q8NBV8 401 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 NUP35Q8NFH5 326 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 C18orf15Q96N68 181 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 NDUFAF3Q9BU61 184 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 NAT8BQ9UHF3 227 aa17.22■□□□□ 0.35
HMGA2-208ENST00000537429 IGHV4-4A0A075B6R2 117 aa17.21■□□□□ 0.35
HMGA2-208ENST00000537429 NANOS2P60321 138 aaKnown RBP17.21■□□□□ 0.35
HMGA2-208ENST00000537429 WDR73Q6P4I2 378 aa17.21■□□□□ 0.35
HMGA2-208ENST00000537429 TRGV2A0A075B6R0 118 aa17.21■□□□□ 0.34
HMGA2-208ENST00000537429 SSTP61278 116 aa17.21■□□□□ 0.34
HMGA2-208ENST00000537429 CACNG7P62955 275 aa17.21■□□□□ 0.34
HMGA2-208ENST00000537429 NTF3P20783 257 aa17.19■□□□□ 0.34
HMGA2-208ENST00000537429 ATRAIDQ6UW56 229 aa17.19■□□□□ 0.34
HMGA2-208ENST00000537429 IMMP2LQ96T52 175 aa17.19■□□□□ 0.34
HMGA2-208ENST00000537429 POM121L12Q8N7R1 296 aa17.18■□□□□ 0.34
HMGA2-208ENST00000537429 MSRB1Q9NZV6 116 aa17.18■□□□□ 0.34
HMGA2-208ENST00000537429 FAM3BP58499 235 aaPredicted RBP17.17■□□□□ 0.34
HMGA2-208ENST00000537429 A0A1B0GUT8 65 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 Q6ZTC4 211 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 JPT2Q9H910 190 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 A8MWV9 139 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 ATP6V1G1O75348 118 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 CFAP126Q5VTH2 177 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 BORCS7Q96B45 105 aa17.16■□□□□ 0.34
HMGA2-208ENST00000537429 TRAV4A0A0B4J268 109 aa17.15■□□□□ 0.34
HMGA2-208ENST00000537429 RS1O15537 224 aa17.15■□□□□ 0.34
HMGA2-208ENST00000537429 TWIST1Q15672 202 aa17.15■□□□□ 0.34
HMGA2-208ENST00000537429 HTN3P15516 51 aa17.14■□□□□ 0.33
HMGA2-208ENST00000537429 OR4C5Q8NGB2 326 aa17.14■□□□□ 0.33
HMGA2-208ENST00000537429 ZNF479Q96JC4 524 aa17.14■□□□□ 0.33
HMGA2-208ENST00000537429 IGHV3-53P01767 116 aa17.13■□□□□ 0.33
HMGA2-208ENST00000537429 ATP5G1P05496 136 aa17.13■□□□□ 0.33
HMGA2-208ENST00000537429 SAMD10Q9BYL1 202 aa17.13■□□□□ 0.33
HMGA2-208ENST00000537429 CRYGDP07320 174 aa17.12■□□□□ 0.33
HMGA2-208ENST00000537429 RIGQ13278 110 aa17.12■□□□□ 0.33
HMGA2-208ENST00000537429 KCNIP4Q6PIL6 250 aa17.12■□□□□ 0.33
HMGA2-208ENST00000537429 WWC2-AS2Q96NR7 200 aa17.12■□□□□ 0.33
HMGA2-208ENST00000537429 AP1S3Q96PC3 154 aa17.12■□□□□ 0.33
HMGA2-208ENST00000537429 NACAE9PAV3 2078 aa17.12■□□□□ 0.33
HMGA2-208ENST00000537429 TRGC1P0CF51 173 aa17.11■□□□□ 0.33
HMGA2-208ENST00000537429 S100A1P23297 94 aa17.11■□□□□ 0.33
HMGA2-208ENST00000537429 S100PP25815 95 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms