RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 TREM1Q9NP99 234 aa11.46□□□□□ -0.57
LTBR-206ENST00000536876 Q9UF83 564 aa11.46□□□□□ -0.57
LTBR-206ENST00000536876 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
LTBR-206ENST00000536876 GNG5P63218 68 aa11.45□□□□□ -0.58
LTBR-206ENST00000536876 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
LTBR-206ENST00000536876 MBD2Q9UBB5 411 aa11.45□□□□□ -0.58
LTBR-206ENST00000536876 SSNA1O43805 119 aa11.44□□□□□ -0.58
LTBR-206ENST00000536876 RPL12P30050 165 aaKnown RBP11.44□□□□□ -0.58
LTBR-206ENST00000536876 TMEM75Q8N9X5 138 aa11.44□□□□□ -0.58
LTBR-206ENST00000536876 NDFIP1Q9BT67 221 aa11.44□□□□□ -0.58
LTBR-206ENST00000536876 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 PGPEP1LA6NFU8 196 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 TOR2AQ5JU69 321 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 PQLC2Q6ZP29 291 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 ARL6IP6Q8N6S5 226 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 MARVELD1Q9BSK0 173 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 WFDC1Q9HC57 220 aa11.43□□□□□ -0.58
LTBR-206ENST00000536876 LRP2P98164 4655 aa11.42□□□□□ -0.58
LTBR-206ENST00000536876 RNF222A6NCQ9 220 aa11.42□□□□□ -0.58
LTBR-206ENST00000536876 RNASE3P12724 160 aaKnown RBP11.42□□□□□ -0.58
LTBR-206ENST00000536876 RAB2AP61019 212 aa11.42□□□□□ -0.58
LTBR-206ENST00000536876 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
LTBR-206ENST00000536876 SGK494Q96LW2 274 aa11.42□□□□□ -0.58
LTBR-206ENST00000536876 A0A1W2PPV4 95 aa11.41□□□□□ -0.58
LTBR-206ENST00000536876 IGLV2-8P01709 118 aa11.41□□□□□ -0.58
LTBR-206ENST00000536876 MGST1P10620 155 aaKnown RBP11.41□□□□□ -0.58
LTBR-206ENST00000536876 PTH2Q96A98 100 aa11.41□□□□□ -0.58
LTBR-206ENST00000536876 PARLQ9H300 379 aa11.41□□□□□ -0.58
LTBR-206ENST00000536876 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
LTBR-206ENST00000536876 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
LTBR-206ENST00000536876 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
LTBR-206ENST00000536876 HMGB3O15347 200 aaKnown RBP11.4□□□□□ -0.58
LTBR-206ENST00000536876 GAGE1Q13065 139 aa11.4□□□□□ -0.58
LTBR-206ENST00000536876 GAGE4Q13068 117 aa11.4□□□□□ -0.58
LTBR-206ENST00000536876 GAGE5Q13069 117 aa11.4□□□□□ -0.58
LTBR-206ENST00000536876 GAGE13Q4V321 117 aa11.4□□□□□ -0.58
LTBR-206ENST00000536876 TNXBP22105 4242 aa11.39□□□□□ -0.59
LTBR-206ENST00000536876 RBFOX3A6NFN3 312 aa11.39□□□□□ -0.59
LTBR-206ENST00000536876 TAAR5O14804 337 aa11.39□□□□□ -0.59
LTBR-206ENST00000536876 MT1HL1P0DM35 61 aa11.39□□□□□ -0.59
LTBR-206ENST00000536876 UFSP1Q6NVU6 142 aa11.39□□□□□ -0.59
LTBR-206ENST00000536876 RMI2Q96E14 147 aa11.39□□□□□ -0.59
LTBR-206ENST00000536876 DAZAP1Q96EP5 407 aaKnown RBP11.39□□□□□ -0.59
LTBR-206ENST00000536876 SERTM2A0A1B0GWG4 89 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 K7EQM0 130 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 ZFP69Q49AA0 526 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 OR10G9Q8NGN4 311 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 OR10G7Q8NGN6 311 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 LINC00479Q96M42 142 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
LTBR-206ENST00000536876 IGLV2-11P01706 119 aa11.37□□□□□ -0.59
LTBR-206ENST00000536876 C14orf178Q8N769 122 aaPredicted RBP11.37□□□□□ -0.59
LTBR-206ENST00000536876 Q8N976 141 aa11.37□□□□□ -0.59
LTBR-206ENST00000536876 JPT2Q9H910 190 aa11.37□□□□□ -0.59
LTBR-206ENST00000536876 URGCP-MRPS24S4R325 110 aa11.37□□□□□ -0.59
LTBR-206ENST00000536876 GCGP01275 180 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 SEC11BP0C7V7 166 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
LTBR-206ENST00000536876 DEFA1P59665 94 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 DEFA3P59666 94 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 NIT1Q86X76 327 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 C5orf17Q8NAS9 161 aa11.36□□□□□ -0.59
LTBR-206ENST00000536876 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
LTBR-206ENST00000536876 A0A087WWC5 75 aa11.35□□□□□ -0.59
LTBR-206ENST00000536876 TCRAP04437 139 aa11.35□□□□□ -0.59
LTBR-206ENST00000536876 RPL37AP61513 92 aaKnown RBP11.35□□□□□ -0.59
LTBR-206ENST00000536876 SMUG1Q53HV7 270 aa11.35□□□□□ -0.59
LTBR-206ENST00000536876 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
LTBR-206ENST00000536876 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
LTBR-206ENST00000536876 A8MWV9 139 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 STAG3L2P0CL84 134 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 STAG3L3P0CL85 134 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
LTBR-206ENST00000536876 FGF8P55075 233 aaPredicted RBP11.34□□□□□ -0.59
LTBR-206ENST00000536876 HSD17B11Q8NBQ5 300 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 OR2T35Q8NGX2 323 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 KLK12Q9UKR0 248 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 RNF213Q63HN8 5207 aa11.34□□□□□ -0.59
LTBR-206ENST00000536876 IGKV3D-20A0A0C4DH25 116 aa11.33□□□□□ -0.6
LTBR-206ENST00000536876 GCHFRP30047 84 aa11.33□□□□□ -0.6
LTBR-206ENST00000536876 LGALSLQ3ZCW2 172 aaPredicted RBP11.33□□□□□ -0.6
LTBR-206ENST00000536876 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
LTBR-206ENST00000536876 RAB24Q969Q5 203 aa11.33□□□□□ -0.6
LTBR-206ENST00000536876 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
LTBR-206ENST00000536876 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
LTBR-206ENST00000536876 UBE2WQ96B02 151 aa11.32□□□□□ -0.6
LTBR-206ENST00000536876 FLI1Q01543 452 aaPredicted RBP11.31□□□□□ -0.6
LTBR-206ENST00000536876 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
LTBR-206ENST00000536876 PRNTQ86SH4 94 aa11.31□□□□□ -0.6
LTBR-206ENST00000536876 SUN5Q8TC36 379 aa11.31□□□□□ -0.6
LTBR-206ENST00000536876 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
LTBR-206ENST00000536876 PANO1I0J062 215 aa11.3□□□□□ -0.6
LTBR-206ENST00000536876 ATP6V0CP27449 155 aa11.3□□□□□ -0.6
LTBR-206ENST00000536876 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
LTBR-206ENST00000536876 ALG5Q9Y673 324 aa11.3□□□□□ -0.6
LTBR-206ENST00000536876 SUMO1P63165 101 aaKnown RBP11.29□□□□□ -0.6
LTBR-206ENST00000536876 ELOBQ15370 118 aa11.29□□□□□ -0.6
LTBR-206ENST00000536876 EPDR1Q9UM22 224 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms