RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 GNRH2O43555 120 aa8.58□□□□□ -1.04
CHD4-203ENST00000535717 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
CHD4-203ENST00000535717 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
CHD4-203ENST00000535717 IBA57Q5T440 356 aaKnown RBP8.58□□□□□ -1.04
CHD4-203ENST00000535717 BAGE2Q86Y30 109 aa8.58□□□□□ -1.04
CHD4-203ENST00000535717 PHLDA1Q8WV24 401 aaPredicted RBP8.58□□□□□ -1.04
CHD4-203ENST00000535717 MLST8Q9BVC4 326 aa8.58□□□□□ -1.04
CHD4-203ENST00000535717 MDFICQ9P1T7 246 aa8.58□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BKO60814 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 SH2D1AO60880 128 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BJP06899 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 DEFB130BP0DP73 79 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 DEFB130AP0DP74 79 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BOP23527 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BBP33778 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 TCL1AP56279 114 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BDP58876 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 DAD1P61803 113 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BCP62807 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 ELOBQ15370 118 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST2H2BEQ16778 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.57□□□□□ -1.04
CHD4-203ENST00000535717 FAM162BQ5T6X4 162 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
CHD4-203ENST00000535717 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BHQ93079 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 ISOC2Q96AB3 205 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 KCNS1Q96KK3 526 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BNQ99877 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BMQ99879 126 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 SDF2L1Q9HCN8 221 aa8.57□□□□□ -1.04
CHD4-203ENST00000535717 TRBV20OR9-2A0A075B6H5 130 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 TRGV11A0A075B6L2 103 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 TRBV24-1A0A075B6N3 115 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 IGKV3D-20A0A0C4DH25 116 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 IGHV3-16A0A0C4DH30 117 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 NUPR2A6NF83 97 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 TMEM250H0YL14 139 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 PHOX2AO14813 284 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 IGLV2-8P01709 118 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 TYMSP04818 313 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 ZNF415Q09FC8 603 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 LINC00612Q8N6U2 182 aa8.56□□□□□ -1.04
CHD4-203ENST00000535717 TRAV10A0A0B4J240 114 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 SPINK4O60575 86 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 GAGE7O76087 117 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 SRP19P09132 144 aaKnown RBP8.55□□□□□ -1.04
CHD4-203ENST00000535717 GAGE12FP0CL80 117 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 GAGE12GP0CL81 117 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 GAGE12IP0CL82 117 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
CHD4-203ENST00000535717 GNG4P50150 75 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 SOHLH1Q5JUK2 328 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 Q6ZTI0 123 aa8.55□□□□□ -1.04
CHD4-203ENST00000535717 DEFB131BA0A096LNP1 70 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 TRGV1A0A0A0MS02 117 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 PGPEP1LA6NFU8 196 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 ORM1P02763 201 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 NDUFA6P56556 154 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 PRR27Q6MZM9 219 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 ZNF575Q86XF7 245 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
CHD4-203ENST00000535717 PARLQ9H300 379 aa8.54□□□□□ -1.04
CHD4-203ENST00000535717 MRPL16Q9NX20 251 aaKnown RBP8.54□□□□□ -1.04
CHD4-203ENST00000535717 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
CHD4-203ENST00000535717 MGST1P10620 155 aaKnown RBP8.53□□□□□ -1.04
CHD4-203ENST00000535717 HTN3P15516 51 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 CEBPGP53567 150 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 LGALS9BQ3B8N2 356 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 LINC01559Q495D7 138 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 CDPF1Q6NVV7 123 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 SMIM12Q96EX1 92 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 HIST1H2BLQ99880 126 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 SPXQ9BT56 116 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
CHD4-203ENST00000535717 KLK5Q9Y337 293 aaPredicted RBP8.53□□□□□ -1.04
CHD4-203ENST00000535717 C9JCJ5 164 aa8.52□□□□□ -1.05
CHD4-203ENST00000535717 RNASE3P12724 160 aaKnown RBP8.52□□□□□ -1.05
CHD4-203ENST00000535717 C9orf85Q96MD7 179 aa8.52□□□□□ -1.05
CHD4-203ENST00000535717 TRGV2A0A075B6R0 118 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 TMSB15BA0A087X1C1 80 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 GRIFINA4D1Z8 144 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 M0R2P5 195 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 ATP5G1P05496 136 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 ASIPP42127 132 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 RPL19P84098 196 aaKnown RBP8.51□□□□□ -1.05
CHD4-203ENST00000535717 OCC1Q8TAD7 63 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 RASL10AQ92737 203 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 C18orf15Q96N68 181 aa8.51□□□□□ -1.05
CHD4-203ENST00000535717 C19orf71A6NCJ1 209 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 IGLL5B9A064 214 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 K7EN84 100 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 M0R143 59 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 DLEU1O43261 78 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 CXCL1P09341 107 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 TRGC1P0CF51 173 aa8.5□□□□□ -1.05
CHD4-203ENST00000535717 GZMBP10144 247 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms