RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CFAP54Q96N23 3096 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 BRCA2P51587 3418 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 LOC105371267A0A1B0GV96 52 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 TMEM189A5PLL7 270 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 BBIP1A8MTZ0 92 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 EDF1O60869 148 aaKnown RBP0.81□□□□□ -2.28
PRKDC-205ENST00000535375 SULT1C4O75897 302 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 IGF2P01344 180 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 PAEPP09466 180 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 PSPHP78330 225 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 TMEM91Q6ZNR0 172 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 C3orf62Q6ZUJ4 267 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 TCTE3Q8IZS6 198 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 AIF1LQ9BQI0 150 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 METTL1Q9UBP6 276 aaKnown RBP0.81□□□□□ -2.28
PRKDC-205ENST00000535375 UTRNP46939 3433 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 PRRC2CQ9Y520 2896 aaKnown RBP0.81□□□□□ -2.28
PRKDC-205ENST00000535375 PTPRGP23470 1445 aa0.81□□□□□ -2.28
PRKDC-205ENST00000535375 LRP5O75197 1615 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 OR2H2O95918 312 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 DBIP07108 87 aaKnown RBP0.8□□□□□ -2.28
PRKDC-205ENST00000535375 CKS2P33552 79 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 Q6ZQY7 126 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 ATOH7Q8N100 152 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 OR4S1Q8NGB4 309 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 AP1S3Q96PC3 154 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 SMIM7Q9BQ49 75 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 DNAJC15Q9Y5T4 150 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 FANCMQ8IYD8 2048 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 CRYBG3Q68DQ2 2970 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 ASPMQ8IZT6 3477 aa0.8□□□□□ -2.28
PRKDC-205ENST00000535375 SPTAN1Q13813 2472 aaKnown RBP0.79□□□□□ -2.28
PRKDC-205ENST00000535375 ZGRF1Q86YA3 2104 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 IGHV1-24A0A0C4DH33 117 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 TRBV30A0A0K0K1B3 111 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 PNMA8CA0A1B0GUJ8 204 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 CDC42EP2O14613 210 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 CD3DP04234 171 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 CMPK1P30085 196 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 CCL19Q99731 98 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 MRPL35Q9NZE8 188 aaKnown RBP0.79□□□□□ -2.28
PRKDC-205ENST00000535375 CEP295Q9C0D2 2601 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 PIEZO2Q9H5I5 2752 aa0.79□□□□□ -2.28
PRKDC-205ENST00000535375 ZDBF2Q9HCK1 2354 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.78□□□□□ -2.28
PRKDC-205ENST00000535375 SONP18583 2426 aaKnown RBP0.78□□□□□ -2.28
PRKDC-205ENST00000535375 KMT2DO14686 5537 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 OTOGQ6ZRI0 2925 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 ARPC5O15511 151 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 HLA-DRB4P13762 266 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 HIST1H1BP16401 226 aaKnown RBP0.78□□□□□ -2.28
PRKDC-205ENST00000535375 PCBD1P61457 104 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 SNRPD3P62318 126 aaKnown RBP0.78□□□□□ -2.28
PRKDC-205ENST00000535375 RHOHQ15669 191 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 OR8J3Q8NGG0 315 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 BATF3Q9NR55 127 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 COMMD3Q9UBI1 195 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 HLA-DRB4X5D2U9 266 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 HERC2O95714 4834 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 COL12A1Q99715 3063 aa0.78□□□□□ -2.28
PRKDC-205ENST00000535375 DCHS1Q96JQ0 3298 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 TPRP12270 2363 aaKnown RBP0.77□□□□□ -2.29
PRKDC-205ENST00000535375 EP300Q09472 2414 aaPredicted RBP0.77□□□□□ -2.29
PRKDC-205ENST00000535375 NF1P21359 2839 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 NBDYA0A0U1RRE5 68 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 TMEM30CPA0ZSE6 113 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 AKR1D1P51857 326 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 XAF1Q6GPH4 301 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 C10orf99Q6UWK7 81 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 LYPD5Q6UWN5 251 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 CALML5Q9NZT1 146 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 MRPL36Q9P0J6 103 aaKnown RBP0.77□□□□□ -2.29
PRKDC-205ENST00000535375 ACACBO00763 2458 aa0.77□□□□□ -2.29
PRKDC-205ENST00000535375 NIPBLQ6KC79 2804 aaeCLIP0.76□□□□□ -2.29
PRKDC-205ENST00000535375 ANK1P16157 1881 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 ARHGEF10O15013 1369 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 ADCYAP1P18509 176 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 IDO2Q6ZQW0 420 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 MAGOHBQ96A72 148 aaKnown RBP0.76□□□□□ -2.29
PRKDC-205ENST00000535375 BANF2Q9H503 90 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 RNF213Q63HN8 5207 aa0.76□□□□□ -2.29
PRKDC-205ENST00000535375 DSPP15924 2871 aaKnown RBP0.76□□□□□ -2.29
PRKDC-205ENST00000535375 KIDINS220Q9ULH0 1771 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 SMIM24O75264 130 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 IGKCP01834 107 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 PLGLB1Q02325 96 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 KRTAP20-1Q3LI63 56 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 PLAC4Q8WY50 150 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 DMAC1Q96GE9 116 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 CEP290O15078 2479 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 WDR87Q6ZQQ6 2873 aa0.75□□□□□ -2.29
PRKDC-205ENST00000535375 TLN2Q9Y4G6 2542 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 A0A0D9SG42 100 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 A0A0G2JMM0 328 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 TPST1O60507 370 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 EVI2AP22794 236 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 KDELR1P24390 212 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 CAV3P56539 151 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms