RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 IGHV3OR16-8A0A075B7F1 116 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 TRAV25A0A0B4J276 109 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 PRNDQ9UKY0 176 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 S4R3C0 116 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 HIVEP2P31629 2446 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 IGLV1-47P01700 117 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
SF3B2-216ENST00000534765 TMEM78Q5T7P6 136 aa7.04□□□□□ -1.28
SF3B2-216ENST00000534765 MRPL32Q9BYC8 188 aaKnown RBP7.04□□□□□ -1.28
SF3B2-216ENST00000534765 IGKV3-7A0A075B6H7 116 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 NDUFB3O43676 98 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 SAA1P0DJI8 122 aaPredicted RBP7.03□□□□□ -1.28
SF3B2-216ENST00000534765 EFNA4P52798 201 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 HERVK_113P63121 156 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 PRR20EP86478 221 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 PRR20CP86479 221 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 PRR20DP86480 221 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 PRR20BP86481 221 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 PRR20AP86496 221 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 MRPL36Q9P0J6 103 aaKnown RBP7.03□□□□□ -1.28
SF3B2-216ENST00000534765 ITPR3Q14573 2671 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 GATA1P15976 413 aaPredicted RBP7.03□□□□□ -1.28
SF3B2-216ENST00000534765 COX7A1P24310 79 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 MRPL51Q4U2R6 128 aaKnown RBP7.03□□□□□ -1.28
SF3B2-216ENST00000534765 IGKV1OR2-108A0A075B7D4 117 aa7.03□□□□□ -1.28
SF3B2-216ENST00000534765 NXT2Q9NPJ8 142 aaKnown RBP7.03□□□□□ -1.28
SF3B2-216ENST00000534765 C2orf82Q6UX34 121 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 LY6G5BQ8NDX9 201 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 ATP6V0E2Q8NHE4 81 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 BPESC1Q9GZL8 116 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV3-64A0A075B6Q5 118 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 TEX49A0A1B0GTD5 131 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 ATP5LO75964 103 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 TMEM170BQ5T4T1 132 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 FMC1Q96HJ9 113 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 DUX3Q96PT4 197 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 TRAV41A0A0B4J266 112 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 SLC25A16P16260 332 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 GATD1Q8NB37 220 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 PRADC1Q9BSG0 188 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 TMEM14BQ9NUH8 114 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 PRO0461Q9UI25 63 aa7.02□□□□□ -1.29
SF3B2-216ENST00000534765 TRGV11A0A075B6L2 103 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 CENPVL3A0A0U1RRI6 287 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 OVOL3O00110 214 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 Q71RC1 249 aaPredicted RBP7.01□□□□□ -1.29
SF3B2-216ENST00000534765 KLHL30-AS1Q8NEE0 82 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
SF3B2-216ENST00000534765 TMEM133Q9H2Q1 129 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 HIGD1BQ9P298 99 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 C15orf61A6NNL5 157 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 LY6LH3BQJ8 138 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 HAX1O00165 279 aa7.01□□□□□ -1.29
SF3B2-216ENST00000534765 SUB1P53999 127 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF3B2-216ENST00000534765 H3BMM0 161 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 NPC2P61916 151 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 UBE2WQ96B02 151 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 TMEM101Q96IK0 257 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 MTORP42345 2549 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 LMO4P61968 165 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 WT1-ASQ06250 92 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 Q8N1Y9 231 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 DNAJC30Q96LL9 226 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 A0A1W2PPI3 338 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 CD69Q07108 199 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 FAM104BQ5XKR9 115 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 Q86TA4 180 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 MAPK1IP1LQ8NDC0 245 aa7□□□□□ -1.29
SF3B2-216ENST00000534765 BUB1B-PAK6H3BSN5 160 aa6.99□□□□□ -1.29
SF3B2-216ENST00000534765 IGLC6P0CF74 106 aa6.99□□□□□ -1.29
SF3B2-216ENST00000534765 PIP4P2Q8N4L2 257 aa6.99□□□□□ -1.29
SF3B2-216ENST00000534765 ZNF492Q9P255 531 aa6.99□□□□□ -1.29
SF3B2-216ENST00000534765 ASIPP42127 132 aa6.99□□□□□ -1.29
SF3B2-216ENST00000534765 HECTD1Q9ULT8 2610 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 CR1P17927 2039 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV3OR16-13A0A075B7E8 117 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV3OR16-10A0A075B7F0 116 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 A0A096LNJ9 63 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV3-74A0A0B4J1X5 117 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 MORN3Q6PF18 240 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-216ENST00000534765 FXYD5Q96DB9 178 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 C8orf49Q96NF6 230 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 MSRB1Q9NZV6 116 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV4-61A0A0C4DH41 118 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 Q8TAT8 98 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 CFHR4Q92496 578 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 FAM167A-AS1Q96KT0 104 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 LINC00527Q9UJ94 153 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 TRAV26-2A0A0B4J265 109 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV1-3A0A0C4DH29 117 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 UPK2O00526 184 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 CRYGBP07316 175 aa6.98□□□□□ -1.29
SF3B2-216ENST00000534765 CRIP2P52943 208 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-216ENST00000534765 FOXA2Q9Y261 457 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-216ENST00000534765 FLNAP21333 2647 aaKnown RBP6.98□□□□□ -1.29
SF3B2-216ENST00000534765 IGHV4-30-2A0A087WSY4 118 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms