RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 ZFYVE16Q7Z3T8 1539 aa0.69□□□□□ -2.3
RDX-215ENST00000533961 ZNF142P52746 1687 aaPredicted RBP0.69□□□□□ -2.3
RDX-215ENST00000533961 EML5Q05BV3 1969 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 KDM6BO15054 1643 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
RDX-215ENST00000533961 LOC110117498A0A087WWA1 95 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 TRBV6-8A0A0A6YYG3 113 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 C3orf85A0A1B0GTC6 90 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 LOC100130705A0A1B0GUX0 176 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 CCDC179H3BU77 68 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 INE1O15225 51 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 NUPR1O60356 82 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 EDF1O60869 148 aaKnown RBP0.68□□□□□ -2.3
RDX-215ENST00000533961 ADCYAP1P18509 176 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 RBP2P50120 134 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 DAPK1P53355 1430 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 MEIG1Q5JSS6 88 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 ZCCHC23Q6ZST2 131 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 SLC25A26Q70HW3 274 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 NDUFA11Q86Y39 141 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 KCNRGQ8N5I3 272 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 DYNLRB2Q8TF09 96 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 PPDPFLQ8WWR9 84 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 AGPAT4-IT1Q9H0P7 198 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 RPRMQ9NS64 109 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 COA4Q9NYJ1 87 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 NOP16Q9Y3C1 178 aaKnown RBP0.68□□□□□ -2.3
RDX-215ENST00000533961 SNURFQ9Y675 71 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 MACF1Q9UPN3 7388 aaKnown RBP0.68□□□□□ -2.3
RDX-215ENST00000533961 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 TNRC6BQ9UPQ9 1833 aaKnown RBP0.68□□□□□ -2.3
RDX-215ENST00000533961 DIDO1Q9BTC0 2240 aaKnown RBP0.68□□□□□ -2.3
RDX-215ENST00000533961 PTPRDP23468 1912 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 CASZ1Q86V15 1759 aa0.68□□□□□ -2.3
RDX-215ENST00000533961 PZPP20742 1482 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 TRPM7Q96QT4 1865 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 CNTLNQ9NXG0 1405 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 TRBV6-4A0A1B0GX49 114 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 A0A1W2PRS3 328 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 C20orf202A1L168 122 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 IGHV3-30P01768 117 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 S100A8P05109 93 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 CD2P06729 351 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 AKAIN1P0CW23 69 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 IGHV3-30-5P0DP03 117 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 RHOHQ15669 191 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 Q56UQ5 140 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 FAM74A1Q5RGS3 127 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 MIC13Q5XKP0 118 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 C12orf73Q69YU5 71 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 Q6AWC8 147 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 TEX261Q6UWH6 196 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 C3orf62Q6ZUJ4 267 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 SNX29P2Q8IUI4 249 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 OBSCN-AS1Q96MR7 158 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 KLK9Q9UKQ9 250 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 SERP1Q9Y6X1 66 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 DLG5Q8TDM6 1919 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 LRP5O75197 1615 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 PTPRMP28827 1452 aa0.67□□□□□ -2.3
RDX-215ENST00000533961 MCM3APO60318 1980 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 NOTCH1P46531 2555 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 TROQ12816 1431 aaPredicted RBP0.66□□□□□ -2.3
RDX-215ENST00000533961 IGLV3-32A0A0A0MS00 114 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 TRBV6-7A0A0A0MS04 114 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 CXorf51AA0A1B0GTR3 108 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 SPAARA0A1B0GVQ0 90 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 F8W1H4 67 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 GEMIN2O14893 280 aaKnown RBP0.66□□□□□ -2.3
RDX-215ENST00000533961 NDUFB6O95139 128 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 DNAL4O96015 105 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 TPPP2P59282 170 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 PPP3R1P63098 170 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 MPV17LQ2QL34 196 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 SPANXN1Q5VSR9 72 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 OR2T2Q6IF00 324 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 DEFB132Q7Z7B7 95 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 GKN2Q86XP6 184 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 ACBD7Q8N6N7 88 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 C5orf17Q8NAS9 161 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 CDC42SE1Q9NRR8 79 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 KTN1Q86UP2 1357 aaKnown RBP0.66□□□□□ -2.3
RDX-215ENST00000533961 SPHKAPQ2M3C7 1700 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 TTC37Q6PGP7 1564 aa0.66□□□□□ -2.3
RDX-215ENST00000533961 CTTNBP2Q8WZ74 1663 aa0.65□□□□□ -2.3
RDX-215ENST00000533961 ZNF609O15014 1411 aa0.65□□□□□ -2.3
RDX-215ENST00000533961 TNRC6AQ8NDV7 1962 aaKnown RBP0.65□□□□□ -2.31
RDX-215ENST00000533961 EXPH5Q8NEV8 1989 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 SHROOM2Q13796 1616 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 ALPK2Q86TB3 2170 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 TRAV30A0A087WSZ9 112 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 LOC107984156A0A0G2JMH3 177 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 MCRIP1C9JLW8 97 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 H3BRM9 83 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 APOC4-APOC2K7ER74 178 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 M0R129 80 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 IFNA17P01571 189 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 APOC2P02655 101 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 GYPBP06028 91 aa0.65□□□□□ -2.31
RDX-215ENST00000533961 PIPP12273 146 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms