RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 TENM4Q6N022 2769 aa12.02□□□□□ -0.49
ATP2C1-224ENST00000533801 HOXD3P31249 432 aaPredicted RBP12.01□□□□□ -0.49
ATP2C1-224ENST00000533801 VPREB3Q9UKI3 123 aa12.01□□□□□ -0.49
ATP2C1-224ENST00000533801 IGHV3-73A0A0B4J1V6 119 aa12.01□□□□□ -0.49
ATP2C1-224ENST00000533801 GTSCR1Q86UQ5 136 aa12.01□□□□□ -0.49
ATP2C1-224ENST00000533801 IGLV1-40P01703 118 aa12.01□□□□□ -0.49
ATP2C1-224ENST00000533801 KNCNA6PVL3 124 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 EMP1P54849 157 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 ST20Q9HBF5 79 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 PCP2Q8IVA1 136 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 GATA3P23771 443 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 PSMB8P28062 276 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 RAB37Q96AX2 223 aa12□□□□□ -0.49
ATP2C1-224ENST00000533801 SNRPD3P62318 126 aaKnown RBP11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 LINC01545Q5VT33 79 aa11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 K7EMI3 77 aa11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 TRAV8-6A0A0B4J262 113 aa11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 FCER1GP30273 86 aa11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 MYOZ3Q8TDC0 251 aa11.99□□□□□ -0.49
ATP2C1-224ENST00000533801 PPBPP02775 128 aa11.98□□□□□ -0.49
ATP2C1-224ENST00000533801 ZNF256Q9Y2P7 627 aaPredicted RBP11.98□□□□□ -0.49
ATP2C1-224ENST00000533801 TCTEX1D4Q5JR98 221 aa11.98□□□□□ -0.49
ATP2C1-224ENST00000533801 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
ATP2C1-224ENST00000533801 OR11H1Q8NG94 326 aa11.98□□□□□ -0.49
ATP2C1-224ENST00000533801 NXT2Q9NPJ8 142 aaKnown RBP11.98□□□□□ -0.49
ATP2C1-224ENST00000533801 MUC4Q99102 2169 aa11.97□□□□□ -0.49
ATP2C1-224ENST00000533801 ZNF56Q15929 161 aa11.97□□□□□ -0.49
ATP2C1-224ENST00000533801 U3KQK5 164 aa11.97□□□□□ -0.49
ATP2C1-224ENST00000533801 SOCS3O14543 225 aa11.96□□□□□ -0.49
ATP2C1-224ENST00000533801 CRXO43186 299 aaPredicted RBP11.96□□□□□ -0.49
ATP2C1-224ENST00000533801 DEFB131AP59861 70 aa11.96□□□□□ -0.49
ATP2C1-224ENST00000533801 KLHL30-AS1Q8NEE0 82 aa11.96□□□□□ -0.49
ATP2C1-224ENST00000533801 MDFICQ9P1T7 246 aa11.96□□□□□ -0.49
ATP2C1-224ENST00000533801 H3BUA1 57 aa11.96□□□□□ -0.5
ATP2C1-224ENST00000533801 DLEU1O43261 78 aa11.96□□□□□ -0.5
ATP2C1-224ENST00000533801 MRPL53Q96EL3 112 aaKnown RBP11.96□□□□□ -0.5
ATP2C1-224ENST00000533801 SCRT2Q9NQ03 307 aa11.96□□□□□ -0.5
ATP2C1-224ENST00000533801 LAGE3Q14657 143 aa11.96□□□□□ -0.5
ATP2C1-224ENST00000533801 GCN1Q92616 2671 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 CD5LO43866 347 aa11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 DYNLRB2Q8TF09 96 aa11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 ZC2HC1BQ5TFG8 222 aa11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 ARL6IP6Q8N6S5 226 aa11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 COX8CQ7Z4L0 72 aa11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 MRPL35Q9NZE8 188 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 MRPS16Q9Y3D3 137 aaKnown RBP11.95□□□□□ -0.5
ATP2C1-224ENST00000533801 FLNBO75369 2602 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 SCGB3A1Q96QR1 104 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 APRG1Q8IVJ8 170 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 DCANP1Q8TF63 244 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 CSTL1Q9H114 145 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 ZNF702PQ9H963 129 aa11.94□□□□□ -0.5
ATP2C1-224ENST00000533801 Q8N8P6 123 aa11.93□□□□□ -0.5
ATP2C1-224ENST00000533801 GCSHP23434 173 aa11.93□□□□□ -0.5
ATP2C1-224ENST00000533801 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
ATP2C1-224ENST00000533801 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
ATP2C1-224ENST00000533801 LGALS1P09382 135 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 RNASE3P12724 160 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 CFHR3Q02985 330 aa11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 Q6YL49 198 aa11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 CR1P17927 2039 aa11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 SRSF2Q01130 221 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 NRACQ8N912 160 aa11.92□□□□□ -0.5
ATP2C1-224ENST00000533801 SETXQ7Z333 2677 aaKnown RBP11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 A0A096LNT2 108 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 IGKV2D-26A0A0A0MRZ7 120 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 K7EP13 123 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 CNFNQ9BYD5 112 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 YAE1D1Q9NRH1 226 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 COX8AP10176 69 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 BVES-AS1Q5T3Y7 98 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 Q8N1Y9 231 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 RASL10AQ92737 203 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 J3QLI3 93 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 IGKCP01834 107 aa11.91□□□□□ -0.5
ATP2C1-224ENST00000533801 LGALS9BQ3B8N2 356 aa11.9□□□□□ -0.5
ATP2C1-224ENST00000533801 LGALS9CQ6DKI2 356 aa11.9□□□□□ -0.5
ATP2C1-224ENST00000533801 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.9□□□□□ -0.5
ATP2C1-224ENST00000533801 SCGB2A2Q13296 93 aa11.9□□□□□ -0.51
ATP2C1-224ENST00000533801 C12orf54Q6X4T0 127 aa11.9□□□□□ -0.51
ATP2C1-224ENST00000533801 ZNF876PQ49A33 203 aa11.89□□□□□ -0.51
ATP2C1-224ENST00000533801 TMEM61Q8N0U2 210 aa11.89□□□□□ -0.51
ATP2C1-224ENST00000533801 RPL39P62891 51 aaKnown RBP11.89□□□□□ -0.51
ATP2C1-224ENST00000533801 ODF1Q14990 250 aa11.89□□□□□ -0.51
ATP2C1-224ENST00000533801 OR4C5Q8NGB2 326 aa11.89□□□□□ -0.51
ATP2C1-224ENST00000533801 KLK9Q2XQG4 91 aa11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 JMJD8Q96S16 334 aa11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 DPM2O94777 84 aa11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 CDKN1BP46527 198 aa11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 TMEM97Q5BJF2 176 aa11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 C2orf66Q6UXQ4 117 aa11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
ATP2C1-224ENST00000533801 LENEPQ9Y5L5 61 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms