RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 PLXNB3Q9ULL4 1909 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 IGHV3-33P01772 117 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 DEFB1P60022 68 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 A0A1W2PNU3 283 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-220ENST00000529526 hADV29S1A0JD25 119 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 WISP2O76076 250 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 GYPEP15421 78 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 ZFP36P26651 326 aaKnown RBP6.31□□□□□ -1.4
CTNND1-220ENST00000529526 UTF1Q5T230 341 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 C5orf56Q8N8D9 126 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 NCOR1O75376 2440 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 K7EQD1 137 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 UBE2BP63146 152 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
CTNND1-220ENST00000529526 SLC25A29Q8N8R3 303 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 Q8N9W7 124 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 SS18L2Q9UHA2 77 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 SIVA1O15304 175 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 CCL25O15444 150 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 IGKV1-17P01599 117 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 PIFOQ8TCI5 191 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 NTN5Q8WTR8 489 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-220ENST00000529526 C16orf54Q6UWD8 224 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 SEM1Q6ZVN7 128 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 RNF138Q8WVD3 245 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 DIDO1Q9BTC0 2240 aaKnown RBP6.3□□□□□ -1.4
CTNND1-220ENST00000529526 E7EUB6 86 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 IFITM1P13164 125 aa6.3□□□□□ -1.4
CTNND1-220ENST00000529526 TRAV4A0A0B4J268 109 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 IGLV2-14P01704 120 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 CFC1P0CG37 223 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 C9orf66Q5T8R8 295 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 C16orf74Q96GX8 76 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 PKDREJQ9NTG1 2253 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 BUB3O43684 328 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 ZFP2Q6ZN57 461 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 C10orf105Q8TEF2 133 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 GAGE12HA6NDE8 117 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 TEX22C9J3V5 150 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 DEFB4AO15263 64 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
CTNND1-220ENST00000529526 ODF3L1Q8IXM7 274 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 Q8N7P7 452 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 GTSF1Q8WW33 167 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 NCKAP5O14513 1909 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 NDUFS5O43920 106 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 BAALC-AS2P0C853 105 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 Q8N1Y9 231 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 ROS1P08922 2347 aa6.29□□□□□ -1.4
CTNND1-220ENST00000529526 WI2-2373I1.2A0A1W2PRP0 233 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 DAND5Q8N907 189 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 LENEPQ9Y5L5 61 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 CRYBA4P53673 196 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 TDRG1Q3Y452 100 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 A0A0J9YXV3 536 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 Q6ZSR3 168 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 MRPL36Q9P0J6 103 aaKnown RBP6.28□□□□□ -1.4
CTNND1-220ENST00000529526 PRB2P02812 416 aaPredicted RBP6.28□□□□□ -1.4
CTNND1-220ENST00000529526 MUSTN1Q8IVN3 82 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 FAM167A-AS1Q96KT0 104 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 SPANXA1Q9NS26 97 aa6.28□□□□□ -1.4
CTNND1-220ENST00000529526 SPTBN1Q01082 2364 aaKnown RBP6.27□□□□□ -1.4
CTNND1-220ENST00000529526 TRBV12-3P01733 135 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 ANKRD29Q8N6D5 301 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 ORMDL1Q9P0S3 153 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 CACNA1BQ00975 2339 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 ACACAQ13085 2346 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 PLA2G5P39877 138 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 ANKRD39Q53RE8 183 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 ICOSQ9Y6W8 199 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 C2orf70A6NJV1 201 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 CADP27708 2225 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 IGHV4-28A0A0C4DH34 117 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 NCR3O14931 201 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 MSMPQ1L6U9 139 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 CAMK2N2Q96S95 79 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 EML6Q6ZMW3 1958 aa6.27□□□□□ -1.41
CTNND1-220ENST00000529526 NDUFC2O95298 119 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 LYPD6Q86Y78 171 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 FRMD6-AS1P0C7T7 363 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 TMEM258P61165 79 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 HERV-K104P63124 156 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 IGF2-ASQ6U949 168 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 DOCK10Q96BY6 2186 aa6.26□□□□□ -1.41
CTNND1-220ENST00000529526 F8W735 103 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-220ENST00000529526 HIST2H2BCQ6DN03 193 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 ATP5G1P05496 136 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 SPART-AS1P0CW21 52 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 DAZ2Q13117 558 aaKnown RBP6.25□□□□□ -1.41
CTNND1-220ENST00000529526 DAZ4Q86SG3 579 aaKnown RBP6.25□□□□□ -1.41
CTNND1-220ENST00000529526 COX7B2Q8TF08 81 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 BAALCQ8WXS3 180 aa6.25□□□□□ -1.41
CTNND1-220ENST00000529526 DAZ3Q9NR90 486 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms