RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TMUB2Q71RG4 321 aa22.6■■□□□ 1.21
SSSCA1-205ENST00000527920 ZC2HC1AQ96GY0 325 aa22.6■■□□□ 1.21
SSSCA1-205ENST00000527920 PFDN1O60925 122 aa22.59■■□□□ 1.21
SSSCA1-205ENST00000527920 TPT1P13693 172 aaKnown RBP22.59■■□□□ 1.21
SSSCA1-205ENST00000527920 PGPEP1LA6NFU8 196 aa22.58■■□□□ 1.21
SSSCA1-205ENST00000527920 PAGE4O60829 102 aa22.58■■□□□ 1.21
SSSCA1-205ENST00000527920 LTAP01374 205 aa22.58■■□□□ 1.21
SSSCA1-205ENST00000527920 ASIPP42127 132 aa22.58■■□□□ 1.21
SSSCA1-205ENST00000527920 LGALSLQ3ZCW2 172 aaPredicted RBP22.58■■□□□ 1.21
SSSCA1-205ENST00000527920 TRBV6-4A0A1B0GX49 114 aa22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 S100A4P26447 101 aaKnown RBP22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 CRIP1P50238 77 aa22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 TIRAPP58753 221 aa22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 DNLZQ5SXM8 178 aa22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 FAM162BQ5T6X4 162 aa22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 IL36BQ9NZH7 164 aa22.57■■□□□ 1.2
SSSCA1-205ENST00000527920 K7EP13 123 aa22.56■■□□□ 1.2
SSSCA1-205ENST00000527920 B4DEV8 164 aa22.55■■□□□ 1.2
SSSCA1-205ENST00000527920 AKR1C3P42330 323 aa22.55■■□□□ 1.2
SSSCA1-205ENST00000527920 RHOHQ15669 191 aa22.55■■□□□ 1.2
SSSCA1-205ENST00000527920 TCTE3Q8IZS6 198 aa22.55■■□□□ 1.2
SSSCA1-205ENST00000527920 SLC25A29Q8N8R3 303 aa22.55■■□□□ 1.2
SSSCA1-205ENST00000527920 SH2D1AO60880 128 aa22.54■■□□□ 1.2
SSSCA1-205ENST00000527920 S100A9P06702 114 aaKnown RBP22.54■■□□□ 1.2
SSSCA1-205ENST00000527920 H2AFB1P0C5Y9 115 aa22.54■■□□□ 1.2
SSSCA1-205ENST00000527920 LINC00315P59091 139 aa22.54■■□□□ 1.2
SSSCA1-205ENST00000527920 ZNF674Q2M3X9 581 aa22.54■■□□□ 1.2
SSSCA1-205ENST00000527920 PRADC1Q9BSG0 188 aa22.54■■□□□ 1.2
SSSCA1-205ENST00000527920 LOC100131303A0A0U1RQF7 123 aa22.53■■□□□ 1.2
SSSCA1-205ENST00000527920 A8MWV9 139 aa22.53■■□□□ 1.2
SSSCA1-205ENST00000527920 KRBOX1C9JBD0 128 aa22.53■■□□□ 1.2
SSSCA1-205ENST00000527920 MGST1P10620 155 aaKnown RBP22.53■■□□□ 1.2
SSSCA1-205ENST00000527920 ZFP2Q6ZN57 461 aa22.52■■□□□ 1.2
SSSCA1-205ENST00000527920 ZNF575Q86XF7 245 aa22.52■■□□□ 1.2
SSSCA1-205ENST00000527920 LY96Q9Y6Y9 160 aa22.52■■□□□ 1.2
SSSCA1-205ENST00000527920 TRAV9-2A0A087WT02 112 aa22.51■■□□□ 1.19
SSSCA1-205ENST00000527920 NHLRC2Q8NBF2 726 aa22.51■■□□□ 1.19
SSSCA1-205ENST00000527920 DNAH10OSP0CZ25 163 aa22.5■■□□□ 1.19
SSSCA1-205ENST00000527920 RAB5CP51148 216 aa22.5■■□□□ 1.19
SSSCA1-205ENST00000527920 LINC01559Q495D7 138 aa22.5■■□□□ 1.19
SSSCA1-205ENST00000527920 EIF5AL1Q6IS14 154 aaKnown RBP22.5■■□□□ 1.19
SSSCA1-205ENST00000527920 PARLQ9H300 379 aa22.5■■□□□ 1.19
SSSCA1-205ENST00000527920 A0A1B0GV50 99 aa22.49■■□□□ 1.19
SSSCA1-205ENST00000527920 Q6ZRN7 208 aaPredicted RBP22.49■■□□□ 1.19
SSSCA1-205ENST00000527920 WFDC10BQ8IUB3 73 aa22.49■■□□□ 1.19
SSSCA1-205ENST00000527920 TRAV1-1A0A0B4J248 108 aa22.48■■□□□ 1.19
SSSCA1-205ENST00000527920 M0R036 132 aa22.48■■□□□ 1.19
SSSCA1-205ENST00000527920 IGHV3-73A0A0B4J1V6 119 aa22.47■■□□□ 1.19
SSSCA1-205ENST00000527920 H3BVH4 76 aa22.47■■□□□ 1.19
SSSCA1-205ENST00000527920 BOLA1Q9Y3E2 137 aa22.47■■□□□ 1.19
SSSCA1-205ENST00000527920 SCO2A0A1W2PP80 73 aa22.46■■□□□ 1.19
SSSCA1-205ENST00000527920 ARMS2P0C7Q2 107 aa22.46■■□□□ 1.19
SSSCA1-205ENST00000527920 EVI2AP22794 236 aa22.46■■□□□ 1.19
SSSCA1-205ENST00000527920 NFE4Q86UQ8 179 aa22.46■■□□□ 1.19
SSSCA1-205ENST00000527920 SYT8Q8NBV8 401 aa22.46■■□□□ 1.19
SSSCA1-205ENST00000527920 SCRT2Q9NQ03 307 aa22.46■■□□□ 1.19
SSSCA1-205ENST00000527920 Q6ZNX1 250 aa22.45■■□□□ 1.18
SSSCA1-205ENST00000527920 MANBALQ9NQG1 85 aa22.45■■□□□ 1.18
SSSCA1-205ENST00000527920 C16orf90A8MZG2 172 aa22.44■■□□□ 1.18
SSSCA1-205ENST00000527920 UFSP1Q6NVU6 142 aa22.44■■□□□ 1.18
SSSCA1-205ENST00000527920 MLST8Q9BVC4 326 aa22.44■■□□□ 1.18
SSSCA1-205ENST00000527920 DMRTA1Q5VZB9 504 aa22.43■■□□□ 1.18
SSSCA1-205ENST00000527920 C10orf126Q8N4M7 172 aa22.43■■□□□ 1.18
SSSCA1-205ENST00000527920 GRIFINA4D1Z8 144 aa22.42■■□□□ 1.18
SSSCA1-205ENST00000527920 RHODO00212 210 aa22.42■■□□□ 1.18
SSSCA1-205ENST00000527920 C1QBP02746 253 aa22.42■■□□□ 1.18
SSSCA1-205ENST00000527920 BAGE2Q86Y30 109 aa22.41■■□□□ 1.18
SSSCA1-205ENST00000527920 TEX46H3BTG2 121 aa22.4■■□□□ 1.18
SSSCA1-205ENST00000527920 SULT1A2P50226 295 aa22.4■■□□□ 1.18
SSSCA1-205ENST00000527920 Q6ZSN1 163 aa22.4■■□□□ 1.18
SSSCA1-205ENST00000527920 C11orf52Q96A22 123 aa22.4■■□□□ 1.18
SSSCA1-205ENST00000527920 PHLDA3Q9Y5J5 127 aa22.4■■□□□ 1.18
SSSCA1-205ENST00000527920 IGHV3-38A0A0C4DH36 116 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 CXCL1P09341 107 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 CCL20P78556 96 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 SPATA12Q7Z6I5 190 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 SLC51BQ86UW2 128 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 JPT2Q9H910 190 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 MSRB1Q9NZV6 116 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 GNG13Q9P2W3 67 aa22.39■■□□□ 1.17
SSSCA1-205ENST00000527920 TRAV8-6A0A0B4J262 113 aa22.38■■□□□ 1.17
SSSCA1-205ENST00000527920 LINC00694P0DN24 101 aa22.38■■□□□ 1.17
SSSCA1-205ENST00000527920 LINC01556Q5JQF7 62 aa22.38■■□□□ 1.17
SSSCA1-205ENST00000527920 ATP6V0E2Q8NHE4 81 aa22.38■■□□□ 1.17
SSSCA1-205ENST00000527920 SAMD10Q9BYL1 202 aa22.38■■□□□ 1.17
SSSCA1-205ENST00000527920 GTSF1LQ9H1H1 148 aa22.38■■□□□ 1.17
SSSCA1-205ENST00000527920 TMSB15BA0A087X1C1 80 aa22.37■■□□□ 1.17
SSSCA1-205ENST00000527920 CRYGDP07320 174 aa22.37■■□□□ 1.17
SSSCA1-205ENST00000527920 LELP1Q5T871 98 aa22.37■■□□□ 1.17
SSSCA1-205ENST00000527920 ZFP82Q8N141 532 aa22.37■■□□□ 1.17
SSSCA1-205ENST00000527920 SFRP2Q96HF1 295 aa22.37■■□□□ 1.17
SSSCA1-205ENST00000527920 TNFRSF18Q9Y5U5 241 aa22.35■■□□□ 1.17
SSSCA1-205ENST00000527920 RPL35P42766 123 aaKnown RBP22.34■■□□□ 1.17
SSSCA1-205ENST00000527920 OR10J3Q5JRS4 329 aa22.34■■□□□ 1.17
SSSCA1-205ENST00000527920 LRP1BQ9NZR2 4599 aa22.34■■□□□ 1.17
SSSCA1-205ENST00000527920 M0R381 172 aa22.33■■□□□ 1.17
SSSCA1-205ENST00000527920 CDK2AP2O75956 126 aa22.32■■□□□ 1.16
SSSCA1-205ENST00000527920 KRTAP10-2P60368 255 aa22.32■■□□□ 1.16
SSSCA1-205ENST00000527920 ERVFC1-1P60608 527 aa22.32■■□□□ 1.16
SSSCA1-205ENST00000527920 RYR1P21817 5038 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms