RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 BOLA1Q9Y3E2 137 aa7.13□□□□□ -1.27
CPSF1-203ENST00000527916 G3V3Q6 166 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
CPSF1-203ENST00000527916 TIRAPP58753 221 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 HAMPP81172 84 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 ZNF726P1Q15940 193 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 ZNF876PQ49A33 203 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 PIK3CD-AS1Q5SR53 167 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 PRNTQ86SH4 94 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 C9orf85Q96MD7 179 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 C11orf21Q9P2W6 132 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 PLA2G2DQ9UNK4 145 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 LY96Q9Y6Y9 160 aa7.12□□□□□ -1.27
CPSF1-203ENST00000527916 TRBV6-4A0A1B0GX49 114 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 FABP5P3A8MUU1 101 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 RS1O15537 224 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 PPT1P50897 306 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 AKR1C8PQ5T2L2 129 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 COX8CQ7Z4L0 72 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 HIST1H2BAQ96A08 127 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
CPSF1-203ENST00000527916 IGLV5-52A0A0A0MRZ9 124 aa7.1□□□□□ -1.27
CPSF1-203ENST00000527916 RNASE3P12724 160 aaKnown RBP7.1□□□□□ -1.27
CPSF1-203ENST00000527916 EVI2AP22794 236 aa7.1□□□□□ -1.27
CPSF1-203ENST00000527916 CFAP126Q5VTH2 177 aa7.1□□□□□ -1.27
CPSF1-203ENST00000527916 LINC00479Q96M42 142 aa7.1□□□□□ -1.27
CPSF1-203ENST00000527916 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
CPSF1-203ENST00000527916 CYTL1Q9NRR1 136 aa7.1□□□□□ -1.27
CPSF1-203ENST00000527916 IGKV3D-20A0A0C4DH25 116 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 PGPEP1LA6NFU8 196 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 FAM74A7A6NL05 159 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 PEX7O00628 323 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 IFNA7P01567 189 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 FHITP49789 147 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 DNLZQ5SXM8 178 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 DPPA3Q6W0C5 159 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 SLC25A29Q8N8R3 303 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 NTN5Q8WTR8 489 aaPredicted RBP7.09□□□□□ -1.27
CPSF1-203ENST00000527916 TCEAL7Q9BRU2 100 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 ZFP30Q9Y2G7 519 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 ARL2-SNX15V9GYD0 113 aa7.09□□□□□ -1.27
CPSF1-203ENST00000527916 TRAV34A0A0B4J273 112 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 LOC100131303A0A0U1RQF7 123 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 ARPC5O15511 151 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 MGST1P10620 155 aaKnown RBP7.08□□□□□ -1.28
CPSF1-203ENST00000527916 ZNF345Q14585 488 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 RHOHQ15669 191 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 ZNF506Q5JVG8 444 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 WFDC10BQ8IUB3 73 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 C10orf126Q8N4M7 172 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 STOML3Q8TAV4 291 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 MSRB1Q9NZV6 116 aa7.08□□□□□ -1.28
CPSF1-203ENST00000527916 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 TRBV6-1A0A0K0K1D8 114 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 HMSDA8MTL9 139 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 A8MWV9 139 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 SEC11BP0C7V7 166 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 FGF8P55075 233 aaPredicted RBP7.07□□□□□ -1.28
CPSF1-203ENST00000527916 UBE2G2P60604 165 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 Q86TA4 180 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 KCNRGQ8N5I3 272 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 NHLRC2Q8NBF2 726 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 FMC1Q96HJ9 113 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 IL36BQ9NZH7 164 aa7.07□□□□□ -1.28
CPSF1-203ENST00000527916 TRAV8-6A0A0B4J262 113 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 UMAD1C9J7I0 102 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 PSCAO43653 123 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 S100A4P26447 101 aaKnown RBP7.06□□□□□ -1.28
CPSF1-203ENST00000527916 ASIPP42127 132 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 CRIP1P50238 77 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 MBD3L1Q8WWY6 194 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 PARLQ9H300 379 aa7.06□□□□□ -1.28
CPSF1-203ENST00000527916 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
CPSF1-203ENST00000527916 A0A0D9SG52 128 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 IBA57-AS1B1ANH7 110 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 B4DEV8 164 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 KRBOX1C9JBD0 128 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 OXTP01178 125 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 C1QBP02746 253 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 CRYGDP07320 174 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 ZNF674Q2M3X9 581 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 LELP1Q5T871 98 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 UFSP1Q6NVU6 142 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 ATP6V0E2Q8NHE4 81 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 GTSF1LQ9H1H1 148 aa7.05□□□□□ -1.28
CPSF1-203ENST00000527916 IGHV3-73A0A0B4J1V6 119 aa7.04□□□□□ -1.28
CPSF1-203ENST00000527916 LTAP01374 205 aa7.04□□□□□ -1.28
CPSF1-203ENST00000527916 S100A9P06702 114 aaKnown RBP7.04□□□□□ -1.28
CPSF1-203ENST00000527916 UBE2G1P62253 170 aa7.04□□□□□ -1.28
CPSF1-203ENST00000527916 LGALSLQ3ZCW2 172 aaPredicted RBP7.04□□□□□ -1.28
CPSF1-203ENST00000527916 FAM162BQ5T6X4 162 aa7.04□□□□□ -1.28
CPSF1-203ENST00000527916 DMRTA1Q5VZB9 504 aa7.04□□□□□ -1.28
CPSF1-203ENST00000527916 CST9LP1Q5W188 147 aa7.04□□□□□ -1.28
CPSF1-203ENST00000527916 OR11H4Q8NGC9 324 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms