RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 CTTNBP2Q8WZ74 1663 aa2.15□□□□□ -2.06
ATM-208ENST00000525537 WDR7Q9Y4E6 1490 aa2.15□□□□□ -2.06
ATM-208ENST00000525537 ROCK2O75116 1388 aaKnown RBP2.15□□□□□ -2.07
ATM-208ENST00000525537 TRAV17A0A0B4J275 112 aa2.15□□□□□ -2.07
ATM-208ENST00000525537 SBSPONQ8IVN8 264 aa2.15□□□□□ -2.07
ATM-208ENST00000525537 DMAC1Q96GE9 116 aa2.15□□□□□ -2.07
ATM-208ENST00000525537 ODF3Q96PU9 254 aa2.15□□□□□ -2.07
ATM-208ENST00000525537 PRRC2BQ5JSZ5 2229 aaKnown RBP2.15□□□□□ -2.07
ATM-208ENST00000525537 E9PCH4 1651 aa2.15□□□□□ -2.07
ATM-208ENST00000525537 SNRNP200O75643 2136 aaKnown RBP2.14□□□□□ -2.07
ATM-208ENST00000525537 TRAV12-2A0A075B6T6 113 aa2.14□□□□□ -2.07
ATM-208ENST00000525537 Q6ZSA8 131 aa2.14□□□□□ -2.07
ATM-208ENST00000525537 AKAP11Q9UKA4 1901 aa2.14□□□□□ -2.07
ATM-208ENST00000525537 CXorf51AA0A1B0GTR3 108 aa2.13□□□□□ -2.07
ATM-208ENST00000525537 LINC00587B1AMM8 73 aa2.13□□□□□ -2.07
ATM-208ENST00000525537 C2orf88Q9BSF0 95 aa2.13□□□□□ -2.07
ATM-208ENST00000525537 ATG5Q9H1Y0 275 aa2.13□□□□□ -2.07
ATM-208ENST00000525537 PEAK1Q9H792 1746 aa2.13□□□□□ -2.07
ATM-208ENST00000525537 FLG2Q5D862 2391 aaPredicted RBP2.12□□□□□ -2.07
ATM-208ENST00000525537 CCDC179H3BU77 68 aa2.12□□□□□ -2.07
ATM-208ENST00000525537 ANGP03950 147 aaKnown RBP2.12□□□□□ -2.07
ATM-208ENST00000525537 APODP05090 189 aa2.12□□□□□ -2.07
ATM-208ENST00000525537 FXYD4P59646 89 aa2.12□□□□□ -2.07
ATM-208ENST00000525537 RPL37AP61513 92 aaKnown RBP2.12□□□□□ -2.07
ATM-208ENST00000525537 IQCJQ1A5X6 159 aa2.12□□□□□ -2.07
ATM-208ENST00000525537 TRBV10-1A0A0K0K1A3 114 aa2.11□□□□□ -2.07
ATM-208ENST00000525537 PRB4P10163 310 aaPredicted RBP2.11□□□□□ -2.07
ATM-208ENST00000525537 MRPL35Q9NZE8 188 aaKnown RBP2.11□□□□□ -2.07
ATM-208ENST00000525537 NALCNQ8IZF0 1738 aa2.11□□□□□ -2.07
ATM-208ENST00000525537 BCL9LQ86UU0 1499 aa2.1□□□□□ -2.07
ATM-208ENST00000525537 SLC25A6P12236 298 aa2.1□□□□□ -2.07
ATM-208ENST00000525537 AMELYQ99218 206 aa2.1□□□□□ -2.07
ATM-208ENST00000525537 SNRNP25Q9BV90 132 aaKnown RBP2.1□□□□□ -2.07
ATM-208ENST00000525537 DLG5Q8TDM6 1919 aa2.1□□□□□ -2.07
ATM-208ENST00000525537 HIGD1CA8MV81 97 aa2.09□□□□□ -2.07
ATM-208ENST00000525537 MEIG1Q5JSS6 88 aa2.09□□□□□ -2.07
ATM-208ENST00000525537 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.09□□□□□ -2.07
ATM-208ENST00000525537 PDCD10Q9BUL8 212 aa2.09□□□□□ -2.07
ATM-208ENST00000525537 ATG2AQ2TAZ0 1938 aa2.09□□□□□ -2.08
ATM-208ENST00000525537 ASCC3Q8N3C0 2202 aaKnown RBP2.09□□□□□ -2.08
ATM-208ENST00000525537 NAIPQ13075 1403 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 MBD5Q9P267 1494 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 NCR3O14931 201 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 PIRTP0C851 137 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 FGF7P21781 194 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 SPANXN1Q5VSR9 72 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 OR2T2Q6IF00 324 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 DEFB132Q7Z7B7 95 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 COPS9Q8WXC6 57 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 NDUFA12Q9UI09 145 aa2.08□□□□□ -2.08
ATM-208ENST00000525537 BTG2P78543 158 aa2.07□□□□□ -2.08
ATM-208ENST00000525537 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
ATM-208ENST00000525537 NDUFA11Q86Y39 141 aa2.07□□□□□ -2.08
ATM-208ENST00000525537 TMEM242Q9NWH2 141 aa2.07□□□□□ -2.08
ATM-208ENST00000525537 SPEF2Q9C093 1822 aa2.07□□□□□ -2.08
ATM-208ENST00000525537 SMG6Q86US8 1419 aaKnown RBP2.07□□□□□ -2.08
ATM-208ENST00000525537 LOC100130705A0A1B0GUX0 176 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 APOC1P02654 83 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 IL5P05113 134 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 CCKP06307 115 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 HIST1H1DP16402 221 aaKnown RBP2.06□□□□□ -2.08
ATM-208ENST00000525537 TMEM203Q969S6 136 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 AGPAT4-IT1Q9H0P7 198 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 PTPRMP28827 1452 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 SPAG17Q6Q759 2223 aa2.06□□□□□ -2.08
ATM-208ENST00000525537 TFF1P04155 84 aa2.05□□□□□ -2.08
ATM-208ENST00000525537 SPTSSAQ969W0 71 aa2.05□□□□□ -2.08
ATM-208ENST00000525537 SEC11CQ9BY50 192 aa2.05□□□□□ -2.08
ATM-208ENST00000525537 RERGLQ9H628 205 aa2.05□□□□□ -2.08
ATM-208ENST00000525537 CDK12Q9NYV4 1490 aaPredicted RBP2.05□□□□□ -2.08
ATM-208ENST00000525537 SPTBP11277 2137 aa2.05□□□□□ -2.08
ATM-208ENST00000525537 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
ATM-208ENST00000525537 COL6A6A6NMZ7 2263 aa2.04□□□□□ -2.08
ATM-208ENST00000525537 NDUFB6O95139 128 aa2.04□□□□□ -2.08
ATM-208ENST00000525537 PIPP12273 146 aaPredicted RBP2.04□□□□□ -2.08
ATM-208ENST00000525537 EFNA4P52798 201 aa2.04□□□□□ -2.08
ATM-208ENST00000525537 XAF1Q6GPH4 301 aa2.04□□□□□ -2.08
ATM-208ENST00000525537 TMEM141Q96I45 108 aa2.04□□□□□ -2.08
ATM-208ENST00000525537 CFTRP13569 1480 aa2.03□□□□□ -2.08
ATM-208ENST00000525537 NBDYA0A0U1RRE5 68 aa2.03□□□□□ -2.08
ATM-208ENST00000525537 IFNGP01579 166 aa2.03□□□□□ -2.08
ATM-208ENST00000525537 Q6ZQY7 126 aa2.03□□□□□ -2.08
ATM-208ENST00000525537 CGREF1Q99674 301 aa2.03□□□□□ -2.08
ATM-208ENST00000525537 DLEC1Q9Y238 1755 aa2.03□□□□□ -2.09
ATM-208ENST00000525537 AKAIN1P0CW23 69 aa2.02□□□□□ -2.09
ATM-208ENST00000525537 SLC48A1Q6P1K1 146 aa2.02□□□□□ -2.09
ATM-208ENST00000525537 LINC00575Q6W349 94 aa2.02□□□□□ -2.09
ATM-208ENST00000525537 PP6455Q8WZ26 134 aa2.02□□□□□ -2.09
ATM-208ENST00000525537 NAA60Q9H7X0 242 aa2.02□□□□□ -2.09
ATM-208ENST00000525537 EIF4G3O43432 1585 aaKnown RBP2.02□□□□□ -2.09
ATM-208ENST00000525537 CITO14578 2027 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 LAMB1P07942 1786 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 SNCGO76070 127 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 ARL14EPLP0DKL9 152 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 FXYD3Q14802 87 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 IFI27L1Q96BM0 104 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 SCN3BQ9NY72 215 aa2.01□□□□□ -2.09
ATM-208ENST00000525537 MED12Q93074 2177 aa2□□□□□ -2.09
ATM-208ENST00000525537 WHAMMP3Q1A5X7 153 aa2□□□□□ -2.09
ATM-208ENST00000525537 C9orf116Q5BN46 136 aaPredicted RBP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms