RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 FAM229BQ4G0N7 80 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 LYRM7Q5U5X0 104 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 NOXRED1Q6NXP6 359 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 SPINT4Q6UDR6 99 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 TMEM136Q6ZRR5 245 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
CSDE1-209ENST00000525132 EXOC3-AS1Q8N2X6 119 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 Q8NAQ8 132 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 TMEM35BQ8NCS4 154 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 OR10P1Q8NGE3 313 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 ZNF675Q8TD23 568 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 DNAJC30Q96LL9 226 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 C2orf50Q96LR7 162 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 DERL1Q9BUN8 251 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 DUSP21Q9H596 190 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 XAGE1AQ9HD64 81 aa1.69□□□□□ -2.14
CSDE1-209ENST00000525132 RPL26L1Q9UNX3 145 aaKnown RBP1.69□□□□□ -2.14
CSDE1-209ENST00000525132 TRAV38-1A0A0B4J264 116 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 A0A1B0GU33 70 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 A0A1W2PRE2 83 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 RIIAD1A6NNX1 92 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 C17orf98A8MV24 154 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 ZNF73O43830 326 aaPredicted RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 CDS2O95674 445 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 DHFRP00374 187 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 MT2AP02795 61 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 CLPSP04118 112 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 HMGN1P05114 100 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 TFPTP0C1Z6 253 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 ZNF22P17026 224 aaPredicted RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 RPS4Y1P22090 263 aaKnown RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 CD200P41217 278 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 HIST1H4AP62805 103 aaKnown RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 MEF2BQ02080 365 aaPredicted RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 ZNF117Q03924 483 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 EIF4EBP1Q13541 118 aaPredicted RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 SMCO1Q147U7 214 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 KRTAP13-3Q3SY46 172 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 SCGB2B2Q4G0G5 96 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 TMEM128Q5BJH2 165 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 TOMM20LQ6UXN7 152 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 KTN1-AS1Q86SY8 53 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 RNF182Q8N6D2 247 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 OR10D4PQ8NGN7 298 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 OR10J5Q8NHC4 309 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 MALSU1Q96EH3 234 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 CYYR1Q96J86 154 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 ZNF2Q9BSG1 426 aaPredicted RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 EFCAB11Q9BUY7 163 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 C6orf62Q9GZU0 229 aaPredicted RBP1.68□□□□□ -2.14
CSDE1-209ENST00000525132 PBOV1Q9GZY1 135 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 FAM107BQ9H098 131 aa1.68□□□□□ -2.14
CSDE1-209ENST00000525132 LOC102725191A0A1B0GVB3 256 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 C1orf196B1AJZ1 125 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 BUB1B-PAK6H3BSN5 160 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 ARPC5O15511 151 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 CYB5BO43169 146 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 IGHV3-7P01780 117 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 MT1FP04733 61 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 S100A4P26447 101 aaKnown RBP1.67□□□□□ -2.14
CSDE1-209ENST00000525132 CASP1P29466 404 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 SRIP30626 198 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 XCL1P47992 114 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 EMP1P54849 157 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 FXYD7P58549 80 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 CDC42P60953 191 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 AKR1C1Q04828 323 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 RPL18Q07020 188 aaKnown RBP1.67□□□□□ -2.14
CSDE1-209ENST00000525132 NNATQ16517 81 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 LTC4SQ16873 150 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 KRTAP25-1Q3LHN0 102 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 SPANXN3Q5MJ09 141 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 AGTRAPQ6RW13 159 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 LCA10Q71F78 164 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 HMGN2P46Q86SG4 172 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 MSRB3Q8IXL7 192 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 MBD3L1Q8WWY6 194 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 DNAJC9Q8WXX5 260 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 MAFIPQ8WZ33 124 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 LZICQ8WZA0 190 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 PLEKHB2Q96CS7 222 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 OR2J1Q9GZK6 312 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 IMUPQ9GZP8 106 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 RBM7Q9Y580 266 aaKnown RBP1.67□□□□□ -2.14
CSDE1-209ENST00000525132 HEY1Q9Y5J3 304 aa1.67□□□□□ -2.14
CSDE1-209ENST00000525132 IGKV2-28A0A075B6P5 120 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 IRGMA1A4Y4 181 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 FABP5P3A8MUU1 101 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 SYNGR2O43760 224 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 CST8O60676 142 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 MRPL33O75394 65 aaKnown RBP1.66□□□□□ -2.14
CSDE1-209ENST00000525132 IGKV2D-28P01615 120 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 PPBPP02775 128 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 BPGMP07738 259 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 CD24P25063 80 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 ZNF80P51504 273 aaPredicted RBP1.66□□□□□ -2.14
CSDE1-209ENST00000525132 RPS11P62280 158 aaKnown RBP eCLIP1.66□□□□□ -2.14
CSDE1-209ENST00000525132 MOBPQ13875 183 aa1.66□□□□□ -2.14
CSDE1-209ENST00000525132 EBI3Q14213 229 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms