RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 TRAV12-3A0A0B4J271 114 aa11.04□□□□□ -0.64
SREK1-209ENST00000520953 ARMS2P0C7Q2 107 aa11.04□□□□□ -0.64
SREK1-209ENST00000520953 PMCHP20382 165 aa11.04□□□□□ -0.64
SREK1-209ENST00000520953 AMTP48728 403 aa11.04□□□□□ -0.64
SREK1-209ENST00000520953 FAM162BQ5T6X4 162 aa11.04□□□□□ -0.64
SREK1-209ENST00000520953 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
SREK1-209ENST00000520953 A0A1B0GUT8 65 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 ZNF324O75467 553 aaPredicted RBP11.03□□□□□ -0.64
SREK1-209ENST00000520953 FAM110AQ9BQ89 295 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
SREK1-209ENST00000520953 PRM2P04554 102 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 GIG44P09565 113 aaPredicted RBP11.03□□□□□ -0.64
SREK1-209ENST00000520953 CDKN1BP46527 198 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 EGFEM1PQ0D2K5 195 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 MUC21Q5SSG8 566 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 SAMD5Q5TGI4 173 aa11.03□□□□□ -0.64
SREK1-209ENST00000520953 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
SREK1-209ENST00000520953 ODF3Q96PU9 254 aa11.02□□□□□ -0.65
SREK1-209ENST00000520953 XCL2Q9UBD3 114 aa11.02□□□□□ -0.65
SREK1-209ENST00000520953 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
SREK1-209ENST00000520953 IGKV3D-20A0A0C4DH25 116 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 TMEM189A5PLL7 270 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 LEPP41159 167 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 NIT1Q86X76 327 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 TPPP3Q9BW30 176 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 C7orf71A4D174 169 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 DDTP30046 118 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
SREK1-209ENST00000520953 Q6AWC8 147 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 URB1-AS1Q96HZ7 61 aa11.01□□□□□ -0.65
SREK1-209ENST00000520953 ORM1P02763 201 aa11□□□□□ -0.65
SREK1-209ENST00000520953 RIGQ13278 110 aa11□□□□□ -0.65
SREK1-209ENST00000520953 GATD1Q8NB37 220 aa11□□□□□ -0.65
SREK1-209ENST00000520953 TRBV7-9A0A0J9YWB2 115 aa11□□□□□ -0.65
SREK1-209ENST00000520953 SPRY2O43597 315 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 NTF3P20783 257 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 KRTDAPP60985 99 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 RNASEKQ6P5S7 137 aaKnown RBP10.99□□□□□ -0.65
SREK1-209ENST00000520953 LYZL1Q6UWQ5 148 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 HSBP1O75506 76 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 Q8N976 141 aa10.99□□□□□ -0.65
SREK1-209ENST00000520953 TRAV21A0A0B4J279 112 aa10.98□□□□□ -0.65
SREK1-209ENST00000520953 A0A1B0GW15 77 aa10.98□□□□□ -0.65
SREK1-209ENST00000520953 TSPOP30536 169 aa10.98□□□□□ -0.65
SREK1-209ENST00000520953 TEX43Q6ZNM6 134 aa10.98□□□□□ -0.65
SREK1-209ENST00000520953 CLUHP3Q96NS8 147 aa10.98□□□□□ -0.65
SREK1-209ENST00000520953 MUC21A0A0G2JKD1 596 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 MUC21A0A140T8X8 626 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 GNRH2O43555 120 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 HTN1P15515 57 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 DEFA6Q01524 100 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 BORCS7Q96B45 105 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 C14orf144Q96I85 54 aa10.97□□□□□ -0.65
SREK1-209ENST00000520953 KIR2DL5BA0A0G2JN68 375 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 KIR2DL5BA0A0G2JPC4 375 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 C3orf79P0CE67 100 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 RPS20P60866 119 aaKnown RBP10.96□□□□□ -0.65
SREK1-209ENST00000520953 SSTP61278 116 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 ZNF493Q6ZR52 646 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 KIR2DL5AQ8N109 375 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
SREK1-209ENST00000520953 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.66
SREK1-209ENST00000520953 IGLC6P0CF74 106 aa10.96□□□□□ -0.66
SREK1-209ENST00000520953 CTRLP40313 264 aa10.96□□□□□ -0.66
SREK1-209ENST00000520953 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
SREK1-209ENST00000520953 KRTAP21-3Q3LHN1 58 aa10.94□□□□□ -0.66
SREK1-209ENST00000520953 INSP01308 110 aa10.94□□□□□ -0.66
SREK1-209ENST00000520953 PMCHL1Q16048 86 aa10.94□□□□□ -0.66
SREK1-209ENST00000520953 CSNK1G2-AS1Q8NCQ2 148 aa10.94□□□□□ -0.66
SREK1-209ENST00000520953 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
SREK1-209ENST00000520953 TIMM8BQ9Y5J9 83 aaPredicted RBP10.94□□□□□ -0.66
SREK1-209ENST00000520953 CSTL1Q9H114 145 aa10.93□□□□□ -0.66
SREK1-209ENST00000520953 IGHV1OR15-1A0A075B7D0 117 aa10.93□□□□□ -0.66
SREK1-209ENST00000520953 NUTF2P61970 127 aaKnown RBP10.93□□□□□ -0.66
SREK1-209ENST00000520953 FAM159AQ6UWV7 190 aa10.93□□□□□ -0.66
SREK1-209ENST00000520953 LINC01587Q99440 93 aa10.93□□□□□ -0.66
SREK1-209ENST00000520953 MDFICQ9P1T7 246 aa10.93□□□□□ -0.66
SREK1-209ENST00000520953 IGHV1-24A0A0C4DH33 117 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 H3BVH4 76 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 LINC00614P0C842 121 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 AZU1P20160 251 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 FAM104BQ5XKR9 115 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 AMN1Q8IY45 258 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 NDUFAF3Q9BU61 184 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 VAMP8Q9BV40 100 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 PAM16Q9Y3D7 125 aa10.92□□□□□ -0.66
SREK1-209ENST00000520953 MUC4Q99102 2169 aa10.91□□□□□ -0.66
SREK1-209ENST00000520953 RNASE3P12724 160 aaKnown RBP10.91□□□□□ -0.66
SREK1-209ENST00000520953 TWIST1Q15672 202 aa10.91□□□□□ -0.66
SREK1-209ENST00000520953 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
SREK1-209ENST00000520953 TMEM208Q9BTX3 173 aa10.91□□□□□ -0.66
SREK1-209ENST00000520953 CNFNQ9BYD5 112 aa10.91□□□□□ -0.66
SREK1-209ENST00000520953 TENM3Q9P273 2699 aa10.91□□□□□ -0.66
SREK1-209ENST00000520953 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms