RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
CLK4-206ENST00000520878 JPT2Q9H910 190 aa8.58□□□□□ -1.04
CLK4-206ENST00000520878 OR1N2Q8NGR9 330 aa8.58□□□□□ -1.04
CLK4-206ENST00000520878 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 Q6ZVH6 145 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 ATP6V0BQ99437 205 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
CLK4-206ENST00000520878 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 DKK2Q9UBU2 259 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
CLK4-206ENST00000520878 SCGB3A1Q96QR1 104 aa8.57□□□□□ -1.04
CLK4-206ENST00000520878 TRAV8-6A0A0B4J262 113 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
CLK4-206ENST00000520878 LAGE3Q14657 143 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 C19orf54Q5BKX5 351 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 ZNF702PQ9H963 129 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 ST20Q9HBF5 79 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 PEMTQ9UBM1 199 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 K7EMT4 169 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 ZNF124Q15973 351 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
CLK4-206ENST00000520878 LINC01619G3V211 115 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 GTSCR1Q86UQ5 136 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 NSUN5P1Q3KNT7 163 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 APRG1Q8IVJ8 170 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 LINC00469Q8N7U9 141 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 LINC01587Q99440 93 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 CSTL1Q9H114 145 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 CDKN1BP46527 198 aa8.55□□□□□ -1.04
CLK4-206ENST00000520878 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
CLK4-206ENST00000520878 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
CLK4-206ENST00000520878 PTTG1IPP53801 180 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 EMP1P54849 157 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
CLK4-206ENST00000520878 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 SAMD13Q5VXD3 122 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 NF1P21359 2839 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 Q8N8P6 123 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
CLK4-206ENST00000520878 ATP5LO75964 103 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 PRM2P04554 102 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 RAB37Q96AX2 223 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 RAX2Q96IS3 184 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 TMEM61Q8N0U2 210 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 DLX4Q92988 240 aaPredicted RBP8.53□□□□□ -1.04
CLK4-206ENST00000520878 APCP25054 2843 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 DCANP1Q8TF63 244 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 MXRA5Q9NR99 2828 aa8.53□□□□□ -1.04
CLK4-206ENST00000520878 ZC2HC1BQ5TFG8 222 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 XCL2Q9UBD3 114 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 FBN2P35556 2912 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 C12orf54Q6X4T0 127 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 A0A0J9YX75 114 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 GCSHP23434 173 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 LINC01545Q5VT33 79 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 Q8N1Y9 231 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 ZNF418Q8TF45 676 aaPredicted RBP8.52□□□□□ -1.05
CLK4-206ENST00000520878 SMIM2Q9BVW6 85 aa8.52□□□□□ -1.05
CLK4-206ENST00000520878 DNAJC9-AS1A6NH13 148 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 SOCS3O14543 225 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 IGKCP01834 107 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 COX8CQ7Z4L0 72 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 TEX29Q8N6K0 151 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 SAP30O75446 220 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 SRSF2Q01130 221 aaKnown RBP8.51□□□□□ -1.05
CLK4-206ENST00000520878 CFHR3Q02985 330 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 TMEM97Q5BJF2 176 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 OR9G4Q8NGQ1 327 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 NAA38Q9BRA0 125 aaKnown RBP8.51□□□□□ -1.05
CLK4-206ENST00000520878 K7EQG2 157 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 CD5LO43866 347 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 DPM2O94777 84 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 Q6ZSV7 163 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 LRRC75A-AS1Q8N1F1 130 aa8.51□□□□□ -1.05
CLK4-206ENST00000520878 MRPL35Q9NZE8 188 aaKnown RBP8.51□□□□□ -1.05
CLK4-206ENST00000520878 MRAP2Q96G30 205 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 U3KQK5 164 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 A0A096LNT2 108 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 ORMDL2Q53FV1 153 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 STHQ8IWL8 128 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 PSMG3-AS1Q96PY0 264 aa8.5□□□□□ -1.05
CLK4-206ENST00000520878 A0A096LNJ9 63 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 RNASE3P12724 160 aaKnown RBP8.49□□□□□ -1.05
CLK4-206ENST00000520878 LGALS9BQ3B8N2 356 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 CD300EQ496F6 205 aaPredicted RBP8.49□□□□□ -1.05
CLK4-206ENST00000520878 LGALS9CQ6DKI2 356 aa8.49□□□□□ -1.05
CLK4-206ENST00000520878 SMR3AQ99954 134 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 204.5 ms