RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 Q8N9W7 124 aa6.62□□□□□ -1.35
CTNNA1-223ENST00000520520 OR2K2Q8NGT1 345 aa6.62□□□□□ -1.35
CTNNA1-223ENST00000520520 RNF185Q96GF1 192 aa6.62□□□□□ -1.35
CTNNA1-223ENST00000520520 MCRIP2Q9BUT9 160 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-223ENST00000520520 SIRPDQ9H106 197 aa6.62□□□□□ -1.35
CTNNA1-223ENST00000520520 ZMAT4Q9H898 229 aa6.62□□□□□ -1.35
CTNNA1-223ENST00000520520 IGHV4-4A0A075B6R2 117 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 TRAV8-6A0A0B4J262 113 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 A0A1W2PPM0 123 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 A0A1W2PRD5 423 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 A0A1W2PRF3 423 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 A0A1W2PRM7 423 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 SMKR1H3BMG3 65 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 H3BUT2 72 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 ZNF207O43670 478 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 IGHV3-23P01764 117 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 CLEC3BP05452 202 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 SMIM17P0DL12 118 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 MED14OSP0DP75 135 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 ZNF80P51504 273 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 ATP5G2Q06055 141 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 ODF1Q14990 250 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 ORMDL2Q53FV1 153 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 SPANXN1Q5VSR9 72 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 UFSP1Q6NVU6 142 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 ADAMTSL5Q6ZMM2 481 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 DYNAPQ8N1N2 210 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 CHAC1Q9BUX1 264 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 TP73-AS1Q9UF72 201 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 SPCS1Q9Y6A9 102 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 SMAD5-AS1Q9Y6J3 95 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 TGP01266 2768 aa6.61□□□□□ -1.35
CTNNA1-223ENST00000520520 LINC01619G3V211 115 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 J3QR89 54 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 OVOL1O14753 267 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 ATP6V0E1O15342 81 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 SNAI2O43623 268 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 GCSHP23434 173 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 FAM106AQ4KMX7 169 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 ERASQ7Z444 233 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 C18orf15Q96N68 181 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 MOB4Q9Y3A3 225 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 MGAM2Q2M2H8 2515 aa6.6□□□□□ -1.35
CTNNA1-223ENST00000520520 WNK2Q9Y3S1 2297 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 TRAV12-1A0A0B4J245 112 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 TRAV21A0A0B4J279 112 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 TRBV7-9A0A0J9YWB2 115 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 H3BUA1 57 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 M0R381 172 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 IGHG4P01861 327 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 GATA3P23771 443 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 OR10J6PQ8NGY7 276 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 LINC00477Q96M19 166 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 C20orf78Q9BR46 151 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 DKK2Q9UBU2 259 aa6.59□□□□□ -1.35
CTNNA1-223ENST00000520520 CMYA5Q8N3K9 4069 aa6.59□□□□□ -1.36
CTNNA1-223ENST00000520520 A0A087WX48 190 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 TRAV40A0A0B4J280 105 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 H7C1H1 209 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 NPFFO15130 113 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 FSHBP01225 129 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 IGHV4-38-2P0DP08 117 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 HLA-DMBP28068 263 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 ASIPP42127 132 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 ERCC8Q13216 396 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 CLEC19AQ6UXS0 136 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 SMIM2Q9BVW6 85 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 TM2D2Q9BX73 214 aa6.58□□□□□ -1.36
CTNNA1-223ENST00000520520 TRAV41A0A0B4J266 112 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 F8VRH5 84 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 HOXA3O43365 443 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 BRI3O95415 125 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 SAA4P35542 130 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 CRIP2P52943 208 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 PAPPA-AS1Q5QFB9 102 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 ZC2HC1BQ5TFG8 222 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 LYRM7Q5U5X0 104 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 BRD3OSQ6XYD6 125 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 PCP2Q8IVA1 136 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 CEND1Q8N111 149 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 NRACQ8N912 160 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 OR11H2Q8NH07 326 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 WFDC12Q8WWY7 111 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 CCDC140Q96MF4 163 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 AGPAT4-IT1Q9H0P7 198 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 MEGF9Q9H1U4 602 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 U3KQE9 123 aa6.57□□□□□ -1.36
CTNNA1-223ENST00000520520 IGLV2-18A0A075B6J9 118 aa6.56□□□□□ -1.36
CTNNA1-223ENST00000520520 IGKV3D-20A0A0C4DH25 116 aa6.56□□□□□ -1.36
CTNNA1-223ENST00000520520 IGHV7-4-1A0A0J9YVY3 117 aa6.56□□□□□ -1.36
CTNNA1-223ENST00000520520 CENPVL3A0A0U1RRI6 287 aa6.56□□□□□ -1.36
CTNNA1-223ENST00000520520 CLPSL1A2RUU4 121 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms