RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 NBL1P41271 181 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 RUSC1-AS1Q66K80 236 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 DEFB104AQ8WTQ1 72 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 RPL39LQ96EH5 51 aaKnown RBP5.14□□□□□ -1.59
CPNE3-203ENST00000517490 LINC00527Q9UJ94 153 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 IGKV3D-20A0A0C4DH25 116 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 MED14OSP0DP75 135 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 SAA4P35542 130 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 C19orf54Q5BKX5 351 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 RHPN1-AS1Q9BWJ2 59 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 CNFNQ9BYD5 112 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 HHLA3Q9XRX5 114 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 PRR14LQ5THK1 2151 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 CENPFP49454 3210 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 NDUFA4O00483 81 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 Q6ZUT4 128 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 LY6G5BQ8NDX9 201 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 KLHL30-AS1Q8NEE0 82 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 NTN5Q8WTR8 489 aaPredicted RBP5.14□□□□□ -1.59
CPNE3-203ENST00000517490 SPANXDQ9BXN6 97 aa5.14□□□□□ -1.59
CPNE3-203ENST00000517490 ZNF561-AS1K7EIQ3 104 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 LEPROTO15243 131 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 FCN3O75636 299 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 DNAL4O96015 105 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 NDUFA11Q86Y39 141 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 ANKRD29Q8N6D5 301 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 CNOT1A5YKK6 2376 aaKnown RBP5.13□□□□□ -1.59
CPNE3-203ENST00000517490 I3L3M4 83 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 RHOHQ15669 191 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 PIP4P1Q86T03 277 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 TMEM219Q86XT9 240 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 NEXN-AS1Q8NBZ9 246 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 TMEM101Q96IK0 257 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 WDR87Q6ZQQ6 2873 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 GVINP1Q7Z2Y8 2422 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 COX8CQ7Z4L0 72 aa5.13□□□□□ -1.59
CPNE3-203ENST00000517490 DAZ1Q9NQZ3 744 aaKnown RBP5.13□□□□□ -1.59
CPNE3-203ENST00000517490 TMEM89A2RUT3 159 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 B5MCH6 92 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 MRPS12O15235 138 aaKnown RBP5.12□□□□□ -1.59
CPNE3-203ENST00000517490 ZFP2Q6ZN57 461 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 TIMM17AQ99595 171 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 C11orf86A6NJI1 115 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 DUX3Q96PT4 197 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 TRBV7-3A0A075B6L6 115 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 LY6LH3BQJ8 138 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 KLRB1Q12918 225 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 MORN3Q6PF18 240 aaPredicted RBP5.12□□□□□ -1.59
CPNE3-203ENST00000517490 LINC00528Q8N1L1 170 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 C15orf53Q8NAA6 179 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 SS18L2Q9UHA2 77 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 GNRH2O43555 120 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 DYNLRB2Q8TF09 96 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 PTH2Q96A98 100 aa5.12□□□□□ -1.59
CPNE3-203ENST00000517490 UBE2L6O14933 153 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 TET2Q6N021 2002 aaPredicted RBP5.11□□□□□ -1.59
CPNE3-203ENST00000517490 C22orf34Q6ZV56 151 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 RNF183Q96D59 192 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 NAV3Q8IVL0 2385 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 TRAV8-3A0A0A6YYJ7 113 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 TCL1BO95988 128 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 CFAP126Q5VTH2 177 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 NRACQ8N912 160 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 Q8N9W7 124 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 SMAD5-AS1Q9Y6J3 95 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 TRAV25A0A0B4J276 109 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 LINC01620Q4KN68 170 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 NPC2P61916 151 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 SUMO4Q6EEV6 95 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 RASL10AQ92737 203 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 NDUFA12Q9UI09 145 aa5.11□□□□□ -1.59
CPNE3-203ENST00000517490 OVOL3O00110 214 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 TNFRSF13BO14836 293 aaPredicted RBP5.1□□□□□ -1.59
CPNE3-203ENST00000517490 SPRY2O43597 315 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 IGHG4P01861 327 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 IGHV4-4A0A075B6R2 117 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 ODF3BA8MYP8 253 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 MUSTN1Q8IVN3 82 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 CARD19Q96LW7 228 aa5.1□□□□□ -1.59
CPNE3-203ENST00000517490 IGHV1OR15-1A0A075B7D0 117 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 IGHV7-4-1A0A0J9YVY3 117 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 GAS8-AS1O95177 125 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 H3BUA1 57 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 SLC25A29Q8N8R3 303 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 A0A0J9YY99 117 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 TRBV10-2A0A0K0K1G8 114 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 PLXNB1O43157 2135 aa5.09□□□□□ -1.59
CPNE3-203ENST00000517490 CENPVL3A0A0U1RRI6 287 aa5.09□□□□□ -1.6
CPNE3-203ENST00000517490 MRGPRG-AS1Q2M3A8 158 aa5.09□□□□□ -1.6
CPNE3-203ENST00000517490 LINC01587Q99440 93 aa5.09□□□□□ -1.6
CPNE3-203ENST00000517490 A0A0B4J2C4 111 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 TRBV7-9A0A0J9YWB2 115 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 LINC01546A6NGU7 62 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 F6UB75 175 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 IGHV1-69P01742 117 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 INSL3P51460 131 aa5.08□□□□□ -1.6
CPNE3-203ENST00000517490 RPL39P62891 51 aaKnown RBP5.08□□□□□ -1.6
CPNE3-203ENST00000517490 PRR30Q53SZ7 412 aaPredicted RBP5.08□□□□□ -1.6
CPNE3-203ENST00000517490 PHLDA1Q8WV24 401 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms