RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PDCL2Q8N4E4 241 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 OR5AK2Q8NH90 309 aa-3.71□□□□□ -3
RNU6-542P-201ENST00000516405 MARF1Q9Y4F3 1742 aaKnown RBP-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 SYNJ2BP-COX16A0A087WUM0 186 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 TINCRA0A1B0GVN0 87 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 A0A1B0GW15 77 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 TMEM210A6NLX4 147 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 J3QRK9 145 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 CDC34P49427 236 aaPredicted RBP-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 NPC2P61916 151 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 PMAIP1Q13794 54 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 FAM216BQ8N7L0 139 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 DIRC1Q969H9 104 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 SIGMAR1Q99720 223 aa-3.72□□□□□ -3
RNU6-542P-201ENST00000516405 WRBO00258 174 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 SSSCA1O60232 199 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 ATP6V1G2O95670 118 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 OTCP00480 354 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 SMIM17P0DL12 118 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 CLDN8P56748 225 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 EDDM3BP56851 147 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 ARF6P62330 175 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 DNM1P34Q6PK57 102 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 SNX29P2Q8IUI4 249 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 PTPRGP23470 1445 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 PRDM2Q13029 1718 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 SPEGQ15772 3267 aa-3.73□□□□□ -3.01
RNU6-542P-201ENST00000516405 H0YJX3 145 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 TAX1BP3O14907 124 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 TRACP01848 142 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 CRHP06850 196 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 DEFA3P59666 94 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 WRNQ14191 1432 aaPredicted RBP eCLIP-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 OR8B8Q15620 311 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 TNFAIP8L2Q6P589 184 aaPredicted RBP-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 PHF5AQ7RTV0 110 aaKnown RBP-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 CCDC77Q9BR77 488 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 LXNQ9BS40 222 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 PBDC1Q9BVG4 233 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 MAP1LC3AQ9H492 121 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 WDR97A6NE52 1622 aa-3.74□□□□□ -3.01
RNU6-542P-201ENST00000516405 KIAA1107Q9UPP5 1409 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 A0A1W2PPV4 95 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 EEF1E1-BLOC1S5C9J1V9 151 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 EDF1O60869 148 aaKnown RBP-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 GGCTO75223 188 aaKnown RBP-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 ATP5HO75947 161 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 FABP4P15090 132 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 POLR2JP52435 117 aaKnown RBP-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 ARPP19P56211 112 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 LINC00523Q86TU6 105 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 CT55Q8WUE5 264 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 TSGA13Q96PP4 275 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 COX16Q9P0S2 106 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 MPC1Q9Y5U8 109 aa-3.75□□□□□ -3.01
RNU6-542P-201ENST00000516405 A0A087WVE0 104 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 IFNA4P05014 189 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 CXCL1P09341 107 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 UCHL3P15374 230 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 C1orf195Q5TG92 126 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 Q6JHZ5 121 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 SFXN4Q6P4A7 337 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 Q6Q795 121 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 CLEC2AQ6UVW9 174 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 BAGE3Q86Y29 109 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 OR51D1Q8NGF3 324 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 CARD19Q96LW7 228 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 MAP1LC3BQ9GZQ8 125 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 MRM2Q9UI43 246 aaKnown RBP-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 HPCAL4Q9UM19 191 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 MUC22E2RYF6 1773 aaPredicted RBP-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 ARHGEF5Q12774 1597 aa-3.76□□□□□ -3.01
RNU6-542P-201ENST00000516405 MYOM3Q5VTT5 1437 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 PTPRMP28827 1452 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 SAA1P0DJI8 122 aaPredicted RBP-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 NDUFA6P56556 154 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 NAA20P61599 178 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 LELP1Q5T871 98 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 LYRM7Q5U5X0 104 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 CLEC2BQ92478 149 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 PPP1R2P1Q96PQ5 205 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 TVP23BQ9NYZ1 205 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 PKIGQ9Y2B9 76 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 ADCY9O60503 1353 aa-3.77□□□□□ -3.01
RNU6-542P-201ENST00000516405 POLA1P09884 1462 aaPredicted RBP-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 NCAPD3P42695 1498 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 ARHGEF12Q9NZN5 1544 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 CCDC169A6NNP5 214 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 E2F6O75461 281 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 GTF2A1P52655 376 aaPredicted RBP-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 TMBIM6P55061 237 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 ZNHIT3Q15649 155 aaPredicted RBP-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 CST9Q5W186 159 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 IFI27L1Q96BM0 104 aa-3.78□□□□□ -3.01
RNU6-542P-201ENST00000516405 ADGRL3Q9HAR2 1447 aa-3.78□□□□□ -3.02
RNU6-542P-201ENST00000516405 DMDP11532 3685 aa-3.79□□□□□ -3.02
RNU6-542P-201ENST00000516405 hCG_1818297A0A087WSY0 165 aa-3.79□□□□□ -3.02
RNU6-542P-201ENST00000516405 FTCDNL1E5RQL4 147 aa-3.79□□□□□ -3.02
RNU6-542P-201ENST00000516405 USMG5Q96IX5 58 aa-3.79□□□□□ -3.02
RNU6-542P-201ENST00000516405 SERPINB11Q96P15 392 aa-3.79□□□□□ -3.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms