RNA–Protein interactions for RNA: ENST00000516257.1

RNU2-53P-201, Transcript of RNA, U2 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU2-53P, Length 147 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-53P-201ENST00000516257 K7ERU9 68 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 FXYD6P3P58550 94 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 NDUFA11Q86Y39 141 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 TCEAL4Q96EI5 215 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 VIRMAQ69YN4 1812 aaKnown RBP0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 CPDO75976 1380 aa0.57□□□□□ -2.32
RNU2-53P-201ENST00000516257 BLMP54132 1417 aaPredicted RBP0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 ASCC3Q8N3C0 2202 aaKnown RBP0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 TEX49A0A1B0GTD5 131 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 ZNF670-ZNF695F2Z2N8 137 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 NPFFO15130 113 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 APOC1P02654 83 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 HMGN1P05114 100 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 SLC25A6P12236 298 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 SPINT3P49223 89 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 RPS25P62851 125 aaKnown RBP0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 KLKP1Q107X0 134 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 ZNF56Q15929 161 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 SPINK13Q1W4C9 94 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 TPT1P8Q9HAU6 139 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 ERG28Q9UKR5 140 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 CDK5RAP2Q96SN8 1893 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 MED12Q93074 2177 aa0.56□□□□□ -2.32
RNU2-53P-201ENST00000516257 SOGA1O94964 1423 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 M0R129 80 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 FXYD1O00168 92 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 COPZ1P61923 177 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 CCDC58Q4VC31 144 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 VSTM2AQ8TAG5 236 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 KMT2BQ9UMN6 2715 aaPredicted RBP0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 CASZ1Q86V15 1759 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 DLEC1Q9Y238 1755 aa0.55□□□□□ -2.32
RNU2-53P-201ENST00000516257 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 ATG2AQ2TAZ0 1938 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 ADGRB1O14514 1584 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 RREB1Q92766 1687 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 A0A0D9SG42 100 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 TFF1P04155 84 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 ZNF137PP52743 207 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 LINC01545Q5VT33 79 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 MIC13Q5XKP0 118 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 OR2T2Q6IF00 324 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 SCIMPQ6UWF3 145 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 Q6ZUT4 128 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 PPP1R1CQ8WVI7 109 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 PLXNA2O75051 1894 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 PTPRMP28827 1452 aa0.54□□□□□ -2.32
RNU2-53P-201ENST00000516257 NINQ8N4C6 2090 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 TRAV12-2A0A075B6T6 113 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 NDUFA2O43678 99 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 PITX3O75364 302 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 LY6G6CO95867 125 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 PYYP10082 97 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 GUCA1AP43080 201 aaPredicted RBP0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 RPL37P61927 97 aaKnown RBP0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 RRAS2P62070 204 aaPredicted RBP0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 SPCS2Q15005 226 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 C6orf52Q5T4I8 152 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 SPANXN1Q5VSR9 72 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 IFI27L1Q96BM0 104 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 PSMG3Q9BT73 122 aaPredicted RBP0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 TMEM191AQ9H0A3 160 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 TMEM14BQ9NUH8 114 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 COA4Q9NYJ1 87 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 BET1LQ9NYM9 111 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 NDUFA12Q9UI09 145 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 TMEM2Q9UHN6 1383 aa0.53□□□□□ -2.32
RNU2-53P-201ENST00000516257 BICRAQ9NZM4 1560 aa0.53□□□□□ -2.33
RNU2-53P-201ENST00000516257 TCRBV3S1A0A5B6 114 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 PIRTP0C851 137 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 TSKUQ8WUA8 353 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 TMEM141Q96I45 108 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 SDF2Q99470 211 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 FAM107BQ9H098 131 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 C10orf95Q9H7T3 257 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 ZNF142P52746 1687 aaPredicted RBP0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 BCORL1Q5H9F3 1711 aa0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 AFDNP55196 1824 aaKnown RBP0.52□□□□□ -2.33
RNU2-53P-201ENST00000516257 A0A096LNT2 108 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 MYOM3Q5VTT5 1437 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 SLC48A1Q6P1K1 146 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 CYP2G1PQ6ZSU1 146 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 KCNRGQ8N5I3 272 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 DSCR8Q96T75 97 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 TSC22D3Q99576 134 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 CCDC167Q9P0B6 97 aa0.51□□□□□ -2.33
RNU2-53P-201ENST00000516257 MYH13Q9UKX3 1938 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 GRIN2AQ12879 1464 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 TRAV12-3A0A0B4J271 114 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 IL5P05113 134 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 ELOF1P60002 83 aaKnown RBP0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 NPC2P61916 151 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 SELENOWP63302 87 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 SARNPP82979 210 aaKnown RBP0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 C9orf116Q5BN46 136 aaPredicted RBP0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 SPATA8Q6RVD6 105 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 SPTBP11277 2137 aa0.5□□□□□ -2.33
RNU2-53P-201ENST00000516257 DAPK1P53355 1430 aa0.49□□□□□ -2.33
RNU2-53P-201ENST00000516257 RBAKDNA6NC62 111 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms