RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ZNF253O75346 499 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 AZU1P20160 251 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 ELOBQ15370 118 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 PSG3Q16557 428 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 IQCF2Q8IXL9 164 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 OR4B1Q8NGF8 309 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 SLC50A1Q9BRV3 221 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 PARLQ9H300 379 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 SAV1Q9H4B6 383 aaPredicted RBP6.18□□□□□ -1.42
NUP54-211ENST00000512151 TMEM167BQ9NRX6 74 aa6.18□□□□□ -1.42
NUP54-211ENST00000512151 IGLV5-52A0A0A0MRZ9 124 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 PGPA6NDG6 321 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 MT1HL1P0DM35 61 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 UBE2G2P60604 165 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 PSG9Q00887 426 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 PDE6HQ13956 83 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 CLUHP3Q96NS8 147 aa6.17□□□□□ -1.42
NUP54-211ENST00000512151 A0A1W2PRE2 83 aa6.16□□□□□ -1.42
NUP54-211ENST00000512151 GGTLC3B5MD39 225 aa6.16□□□□□ -1.42
NUP54-211ENST00000512151 HOXA5P20719 270 aa6.16□□□□□ -1.42
NUP54-211ENST00000512151 ID1P41134 155 aa6.16□□□□□ -1.42
NUP54-211ENST00000512151 RPL23P62829 140 aaKnown RBP6.16□□□□□ -1.42
NUP54-211ENST00000512151 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
NUP54-211ENST00000512151 FOXI2Q6ZQN5 318 aa6.16□□□□□ -1.42
NUP54-211ENST00000512151 RPUSD4Q96CM3 377 aaKnown RBP6.16□□□□□ -1.42
NUP54-211ENST00000512151 OTORQ9NRC9 128 aa6.16□□□□□ -1.42
NUP54-211ENST00000512151 TRBV24-1A0A075B6N3 115 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 C5orf52A6NGY3 159 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 CXCL1P09341 107 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 GNG5P63218 68 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 OR5I1Q13606 314 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 ADIRFQ15847 76 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 ZNF674Q2M3X9 581 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 AMTNQ6UX39 209 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 ZFP82Q8N141 532 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 ZNF738Q8NE65 137 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 C11orf52Q96A22 123 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 ANAPC16Q96DE5 110 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.43
NUP54-211ENST00000512151 BTF3L4Q96K17 158 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 PYGO2Q9BRQ0 406 aa6.15□□□□□ -1.43
NUP54-211ENST00000512151 IGKV2-40A0A087WW87 121 aaPredicted RBP6.14□□□□□ -1.43
NUP54-211ENST00000512151 A0A0J9YX75 114 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 DIRC3C9JPN6 131 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 SIVA1O15304 175 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 CRXO43186 299 aaPredicted RBP6.14□□□□□ -1.43
NUP54-211ENST00000512151 IGKV2D-40P01614 121 aaPredicted RBP6.14□□□□□ -1.43
NUP54-211ENST00000512151 PFN1P07737 140 aaKnown RBP6.14□□□□□ -1.43
NUP54-211ENST00000512151 ERCC8Q13216 396 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 SAMD13Q5VXD3 122 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 CST9LP1Q5W188 147 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 Q6ZSA8 131 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 OR8A1Q8NGG7 326 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 IGF2BP2-AS1Q96M15 143 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 TMEM208Q9BTX3 173 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
NUP54-211ENST00000512151 TGIF2-C20orf24A0A0A6YYL0 155 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 A8MTW9 85 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 H7BYZ3 331 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 SLC25A5P05141 298 aaKnown RBP6.13□□□□□ -1.43
NUP54-211ENST00000512151 TSPOP30536 169 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 RPS10P46783 165 aaKnown RBP6.13□□□□□ -1.43
NUP54-211ENST00000512151 CNN1P51911 297 aaKnown RBP6.13□□□□□ -1.43
NUP54-211ENST00000512151 LINC01551Q86U37 167 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 LINC00479Q96M42 142 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 VGLL1Q99990 258 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 AGPAT4-IT1Q9H0P7 198 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 EPDR1Q9UM22 224 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 RPH3ALQ9UNE2 315 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 LY96Q9Y6Y9 160 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 URGCP-MRPS24S4R325 110 aa6.13□□□□□ -1.43
NUP54-211ENST00000512151 FAT4Q6V0I7 4981 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 A0A096LPF7 62 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 C9JCJ5 164 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 PPP1R2P9O14990 202 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 NXPH4O95158 308 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 TCRAP04437 139 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 S100A6P06703 90 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 CT45A10P0DMU9 189 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 S100PP25815 95 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 HNRNPA3P51991 378 aaKnown RBP6.12□□□□□ -1.43
NUP54-211ENST00000512151 SNRPEP62304 92 aaKnown RBP6.12□□□□□ -1.43
NUP54-211ENST00000512151 HIST1H1AQ02539 215 aaPredicted RBP6.12□□□□□ -1.43
NUP54-211ENST00000512151 EBLN2Q6P2I7 272 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 NFE4Q86UQ8 179 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 LINC00518Q8N0U6 118 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 C5orf17Q8NAS9 161 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 SGK494Q96LW2 274 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 IMMP2LQ96T52 175 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 DERL1Q9BUN8 251 aa6.12□□□□□ -1.43
NUP54-211ENST00000512151 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 TRAV8-1A0A0A6YYK1 113 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 TRAV34A0A0B4J273 112 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 M0R2Z0 102 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 GAS8-AS1O95177 125 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 IGLV2-11P01706 119 aa6.11□□□□□ -1.43
NUP54-211ENST00000512151 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms