RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CYB561D1Q8N8Q1 229 aa7.35□□□□□ -1.23
RNF4-212ENST00000509258 SLC25A29Q8N8R3 303 aa7.35□□□□□ -1.23
RNF4-212ENST00000509258 NHLRC2Q8NBF2 726 aa7.35□□□□□ -1.23
RNF4-212ENST00000509258 IGHV3-38A0A0C4DH36 116 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 CTXND1A0A1B0GTU2 59 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 MBP02144 154 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
RNF4-212ENST00000509258 GCSHP23434 173 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 CRIP1P50238 77 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 TIRAPP58753 221 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 ZNF876PQ49A33 203 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 Q8N3U1 123 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 INO80EQ8NBZ0 244 aaPredicted RBP7.34□□□□□ -1.23
RNF4-212ENST00000509258 NTN5Q8WTR8 489 aaPredicted RBP7.34□□□□□ -1.23
RNF4-212ENST00000509258 PRADC1Q9BSG0 188 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 JPT2Q9H910 190 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 TMEM167BQ9NRX6 74 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 ARL2-SNX15V9GYD0 113 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 MYCBP2O75592 4640 aa7.34□□□□□ -1.23
RNF4-212ENST00000509258 VPS13BQ7Z7G8 4022 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 A0A1W2PRE2 83 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 FBLL1A6NHQ2 334 aaKnown RBP7.33□□□□□ -1.24
RNF4-212ENST00000509258 FAM74A7A6NL05 159 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 K7EQM0 130 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 ARPC5O15511 151 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 FHITP49789 147 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 RHOHQ15669 191 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 SMUG1Q53HV7 270 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 Q86TA4 180 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 ZC2HC1AQ96GY0 325 aa7.33□□□□□ -1.24
RNF4-212ENST00000509258 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
RNF4-212ENST00000509258 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 PEX7O00628 323 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 TAAR5O14804 337 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 LINC00694P0DN24 101 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 ZFP69Q49AA0 526 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 LINC01556Q5JQF7 62 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 OR10J3Q5JRS4 329 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 OR11H4Q8NGC9 324 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 SAMD10Q9BYL1 202 aa7.32□□□□□ -1.24
RNF4-212ENST00000509258 BORCS7-ASMTA0A0B4J1R7 106 aa7.31□□□□□ -1.24
RNF4-212ENST00000509258 MAP1LC3B2A6NCE7 125 aa7.31□□□□□ -1.24
RNF4-212ENST00000509258 RGS21Q2M5E4 152 aa7.31□□□□□ -1.24
RNF4-212ENST00000509258 UFSP1Q6NVU6 142 aa7.31□□□□□ -1.24
RNF4-212ENST00000509258 MAP1LC3BQ9GZQ8 125 aa7.31□□□□□ -1.24
RNF4-212ENST00000509258 PARLQ9H300 379 aa7.31□□□□□ -1.24
RNF4-212ENST00000509258 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
RNF4-212ENST00000509258 TRBV6-4A0A1B0GX49 114 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 H3BVH4 76 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 M0R036 132 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 IFNA7P01567 189 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 C14orf178Q8N769 122 aaPredicted RBP7.3□□□□□ -1.24
RNF4-212ENST00000509258 PTH2Q96A98 100 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 TMEM70Q9BUB7 260 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
RNF4-212ENST00000509258 GRIFINA4D1Z8 144 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 LRCOL1A6NCL2 159 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 IBA57-AS1B1ANH7 110 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 KRBOX1C9JBD0 128 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 SH2D1AO60880 128 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 SMR3BP02814 79 aaPredicted RBP7.29□□□□□ -1.24
RNF4-212ENST00000509258 MGST1P10620 155 aaKnown RBP7.29□□□□□ -1.24
RNF4-212ENST00000509258 SAPCD1Q5SSQ6 148 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 LELP1Q5T871 98 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 DMRTA1Q5VZB9 504 aa7.29□□□□□ -1.24
RNF4-212ENST00000509258 A0A1B0GV50 99 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 IGHV3-30P01768 117 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 IGHV3-33P01772 117 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 IGHV3-30-3P0DP02 117 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 IGHV3-30-5P0DP03 117 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 HAMPP81172 84 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 WFDC2Q14508 124 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 LAGE3Q14657 143 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 TOR2AQ5JU69 321 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 COX8CQ7Z4L0 72 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 KCNRGQ8N5I3 272 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 Q9HAA7 133 aa7.28□□□□□ -1.24
RNF4-212ENST00000509258 TMSB15BA0A087X1C1 80 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 GAGE12JA6NER3 117 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 FABP5P3A8MUU1 101 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 B4DEV8 164 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 SEC11BP0C7V7 166 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 S100A4P26447 101 aaKnown RBP7.27□□□□□ -1.25
RNF4-212ENST00000509258 GAGE1Q13065 139 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 GAGE4Q13068 117 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 GAGE5Q13069 117 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 LGALSLQ3ZCW2 172 aaPredicted RBP7.27□□□□□ -1.25
RNF4-212ENST00000509258 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 Q8N814 137 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 ATP6V0E2Q8NHE4 81 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 DNAJC30Q96LL9 226 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 GTSF1LQ9H1H1 148 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 IL36BQ9NZH7 164 aa7.27□□□□□ -1.25
RNF4-212ENST00000509258 TRAV8-3A0A0A6YYJ7 113 aa7.26□□□□□ -1.25
RNF4-212ENST00000509258 A8MWV9 139 aa7.26□□□□□ -1.25
RNF4-212ENST00000509258 PAGE4O60829 102 aa7.26□□□□□ -1.25
RNF4-212ENST00000509258 LTAP01374 205 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms