RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LINC00479Q96M42 142 aa4.04□□□□□ -1.76
LSM3P4-201ENST00000502948 FAM30AQ9NZY2 134 aa4.04□□□□□ -1.76
LSM3P4-201ENST00000502948 NAGKQ9UJ70 344 aa4.04□□□□□ -1.76
LSM3P4-201ENST00000502948 TRAV8-1A0A0A6YYK1 113 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 A0A1W2PRE2 83 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 RNF222A6NCQ9 220 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 INMT-MINDY4F8WBC2 141 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 UPK1BO75841 260 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 MBP02144 154 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 FLI1Q01543 452 aaPredicted RBP4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 ZFP69Q49AA0 526 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 LRRC37A5PQ49AS3 106 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 SMUG1Q53HV7 270 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 ZNF506Q5JVG8 444 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 UFSP1Q6NVU6 142 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 DPPA3Q6W0C5 159 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 CYB561D1Q8N8Q1 229 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 Q8N976 141 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 OR10G7Q8NGN6 311 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 RMI2Q96E14 147 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 HYLS1Q96M11 299 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 NKX6-2Q9C056 277 aaPredicted RBP4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 PARLQ9H300 379 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 TMEM167BQ9NRX6 74 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 IL36BQ9NZH7 164 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 C11orf21Q9P2W6 132 aa4.03□□□□□ -1.76
LSM3P4-201ENST00000502948 TRBV10-1A0A0K0K1A3 114 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 PGPEP1LA6NFU8 196 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 GGTLC3B5MD39 225 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 F6UZH7 168 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 RHODO00212 210 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 SIX6O95475 246 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 GCGP01275 180 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 CDC34P49427 236 aaPredicted RBP4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 ZNF80P51504 273 aaPredicted RBP4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 KRTAP10-4P60372 401 aaPredicted RBP4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 ELOBQ15370 118 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 LINC00528Q8N1L1 170 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 EPDR1Q9UM22 224 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 TNFSF18Q9UNG2 199 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 PSG8Q9UQ74 426 aa4.02□□□□□ -1.77
LSM3P4-201ENST00000502948 IGKV3D-20A0A0C4DH25 116 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 FABP5P3A8MUU1 101 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 CXorf1O96002 111 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 IGLV2-8P01709 118 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 IGHV3-30P01768 117 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 IGHV3-33P01772 117 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 ARL14EPLP0DKL9 152 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 IGHV3-30-3P0DP02 117 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 IGHV3-30-5P0DP03 117 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 RAB2AP61019 212 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 Q0VG73 95 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 C14orf177Q52M58 125 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 NIT1Q86X76 327 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 RAB24Q969Q5 203 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 HIST1H2BAQ96A08 127 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 AQP10Q96PS8 301 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 TCEAL7Q9BRU2 100 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 CHAC1Q9BUX1 264 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 Q9HAA7 133 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 WFDC1Q9HC57 220 aa4.01□□□□□ -1.77
LSM3P4-201ENST00000502948 TRBV6-1A0A0K0K1D8 114 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 GCHFRP30047 84 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 DEFA1P59665 94 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 DEFA3P59666 94 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 PKIAP61925 76 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 SUMO1P63165 101 aaKnown RBP4□□□□□ -1.77
LSM3P4-201ENST00000502948 GNG5P63218 68 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 IFITM3Q01628 133 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 WFDC2Q14508 124 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 SCXQ7RTU7 201 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 SYT8Q8NBV8 401 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 OR10G8Q8NGN5 311 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 SFRP2Q96HF1 295 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 RPH3ALQ9UNE2 315 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 ZFP30Q9Y2G7 519 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 URGCP-MRPS24S4R325 110 aa4□□□□□ -1.77
LSM3P4-201ENST00000502948 IGHV3-73A0A0B4J1V6 119 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 SSNA1O43805 119 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 S100A4P26447 101 aaKnown RBP3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 ATP6V0CP27449 155 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 ASIPP42127 132 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 DGAT2L7PQ6IED9 249 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 DAZ4Q86SG3 579 aaKnown RBP3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 PRNTQ86SH4 94 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 SMIM3Q9BZL3 60 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 ACTR3CQ9C0K3 210 aaPredicted RBP3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 DAZ3Q9NR90 486 aaKnown RBP3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 ARL2-SNX15V9GYD0 113 aa3.99□□□□□ -1.77
LSM3P4-201ENST00000502948 TRBV7-3A0A075B6L6 115 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 CTXND1A0A1B0GTU2 59 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 GAGE12JA6NER3 117 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 RBFOX3A6NFN3 312 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 KRBOX1C9JBD0 128 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 CXCL1P09341 107 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 FHITP49789 147 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 SMCPP49901 116 aaPredicted RBP3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 UBE2D3P61077 147 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 UBE2D2P62837 147 aa3.98□□□□□ -1.77
LSM3P4-201ENST00000502948 HAMPP81172 84 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms