RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 OR10G9Q8NGN4 311 aa9.97□□□□□ -0.81
HDAC6-236ENST00000498808 OTORQ9NRC9 128 aa9.97□□□□□ -0.81
HDAC6-236ENST00000498808 A0A0D9SG52 128 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 PGPA6NDG6 321 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 USP17L23D6RBM5 183 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 PRSS1P07477 247 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 NHLH2Q02577 135 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 CMTM2Q8TAZ6 248 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 CHCHD7Q9BUK0 85 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 C1orf43Q9BWL3 253 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 NMES1Q9C002 83 aa9.96□□□□□ -0.82
HDAC6-236ENST00000498808 A0A087WX48 190 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 EIF3GO75821 320 aaKnown RBP eCLIP9.95□□□□□ -0.82
HDAC6-236ENST00000498808 S100A5P33763 92 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 Q0VG73 95 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 ELOBQ15370 118 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 TRIQKQ629K1 86 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 UFSP1Q6NVU6 142 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 ENHOQ6UWT2 76 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 SDIM1Q6ZPB5 146 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 OR5C1Q8NGR4 320 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 JPT2Q9H910 190 aa9.95□□□□□ -0.82
HDAC6-236ENST00000498808 A8MWV9 139 aa9.94□□□□□ -0.82
HDAC6-236ENST00000498808 FGF8P55075 233 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-236ENST00000498808 GNG5P63218 68 aa9.94□□□□□ -0.82
HDAC6-236ENST00000498808 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
HDAC6-236ENST00000498808 SGK494Q96LW2 274 aa9.94□□□□□ -0.82
HDAC6-236ENST00000498808 WDR61Q9GZS3 305 aaKnown RBP9.94□□□□□ -0.82
HDAC6-236ENST00000498808 KCNIP2Q9NS61 270 aa9.94□□□□□ -0.82
HDAC6-236ENST00000498808 NOL3O60936 208 aaKnown RBP9.93□□□□□ -0.82
HDAC6-236ENST00000498808 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
HDAC6-236ENST00000498808 KHDC3LQ587J8 217 aa9.93□□□□□ -0.82
HDAC6-236ENST00000498808 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
HDAC6-236ENST00000498808 ZC2HC1AQ96GY0 325 aa9.93□□□□□ -0.82
HDAC6-236ENST00000498808 LINC01600Q96MT4 127 aa9.93□□□□□ -0.82
HDAC6-236ENST00000498808 SEC22CQ9BRL7 303 aa9.93□□□□□ -0.82
HDAC6-236ENST00000498808 TAAR5O14804 337 aa9.92□□□□□ -0.82
HDAC6-236ENST00000498808 HLA-DQA1P01909 254 aa9.92□□□□□ -0.82
HDAC6-236ENST00000498808 FAM74A1Q5RGS3 127 aa9.92□□□□□ -0.82
HDAC6-236ENST00000498808 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
HDAC6-236ENST00000498808 SDHCQ99643 169 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-236ENST00000498808 MBD2Q9UBB5 411 aa9.92□□□□□ -0.82
HDAC6-236ENST00000498808 GCGP01275 180 aa9.91□□□□□ -0.82
HDAC6-236ENST00000498808 LGALSLQ3ZCW2 172 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-236ENST00000498808 HSD17B11Q8NBQ5 300 aa9.91□□□□□ -0.82
HDAC6-236ENST00000498808 NDFIP1Q9BT67 221 aa9.91□□□□□ -0.82
HDAC6-236ENST00000498808 DPH3P1Q9H4G8 78 aa9.91□□□□□ -0.82
HDAC6-236ENST00000498808 CENPXA8MT69 81 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 TAS2R45P59539 299 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 RPL19P84098 196 aaKnown RBP9.9□□□□□ -0.82
HDAC6-236ENST00000498808 CNPY1Q3B7I2 92 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 OR10G7Q8NGN6 311 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 OR2G3Q8NGZ4 309 aa9.9□□□□□ -0.82
HDAC6-236ENST00000498808 LPAP08519 4548 aa9.89□□□□□ -0.83
HDAC6-236ENST00000498808 C17orf112F2Z3M2 114 aa9.89□□□□□ -0.83
HDAC6-236ENST00000498808 CRPP02741 224 aa9.89□□□□□ -0.83
HDAC6-236ENST00000498808 C15orf54Q8N8G6 183 aa9.89□□□□□ -0.83
HDAC6-236ENST00000498808 A0A087WYN8 130 aa9.88□□□□□ -0.83
HDAC6-236ENST00000498808 IGKV3D-20A0A0C4DH25 116 aa9.88□□□□□ -0.83
HDAC6-236ENST00000498808 MPV17L2Q567V2 206 aa9.88□□□□□ -0.83
HDAC6-236ENST00000498808 OR5AC2Q9NZP5 309 aa9.88□□□□□ -0.83
HDAC6-236ENST00000498808 TRAV6A0A075B6T7 132 aa9.87□□□□□ -0.83
HDAC6-236ENST00000498808 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
HDAC6-236ENST00000498808 PHOX2AO14813 284 aa9.87□□□□□ -0.83
HDAC6-236ENST00000498808 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
HDAC6-236ENST00000498808 KRTAP9-2Q9BYQ4 174 aa9.87□□□□□ -0.83
HDAC6-236ENST00000498808 RHODO00212 210 aa9.86□□□□□ -0.83
HDAC6-236ENST00000498808 CHTF8P0CG12 524 aa9.86□□□□□ -0.83
HDAC6-236ENST00000498808 IL7P13232 177 aa9.86□□□□□ -0.83
HDAC6-236ENST00000498808 S100A4P26447 101 aaKnown RBP9.86□□□□□ -0.83
HDAC6-236ENST00000498808 SMUG1Q53HV7 270 aa9.86□□□□□ -0.83
HDAC6-236ENST00000498808 PSG8Q9UQ74 426 aa9.86□□□□□ -0.83
HDAC6-236ENST00000498808 A0A0J9YXV3 536 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 SERTM2A0A1B0GWG4 89 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 PLA2G10O15496 165 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
HDAC6-236ENST00000498808 TCRBP04435 133 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 TCRAP04437 139 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 UBE2D3P61077 147 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 UBE2D2P62837 147 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 MIAQ16674 131 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 FAM74A4Q5TZK3 123 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 PQLC2Q6ZP29 291 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 KIF25-AS1Q9Y6Z4 181 aa9.85□□□□□ -0.83
HDAC6-236ENST00000498808 TRBV6-8A0A0A6YYG3 113 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 H0YIZ8 118 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 CNBPP62633 177 aaKnown RBP9.84□□□□□ -0.83
HDAC6-236ENST00000498808 ZFP69Q49AA0 526 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 RNF185Q96GF1 192 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 NUDT15Q9NV35 164 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
HDAC6-236ENST00000498808 A0A087WWL8 130 aa9.83□□□□□ -0.84
HDAC6-236ENST00000498808 H3BVH4 76 aa9.83□□□□□ -0.84
HDAC6-236ENST00000498808 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
HDAC6-236ENST00000498808 WDR73Q6P4I2 378 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms