RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 Q1RN00 199 aa10.31□□□□□ -0.76
GPC1-209ENST00000495100 SIRPDQ9H106 197 aa10.31□□□□□ -0.76
GPC1-209ENST00000495100 IGKV3OR2-268A0A0C4DH90 116 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 SLC50A1Q9BRV3 221 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 ODF3BA8MYP8 253 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 OPRPNQ99935 248 aaPredicted RBP10.3□□□□□ -0.76
GPC1-209ENST00000495100 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
GPC1-209ENST00000495100 A0A096LNJ9 63 aa10.29□□□□□ -0.76
GPC1-209ENST00000495100 IGHV1-69DA0A0B4J2H0 117 aa10.29□□□□□ -0.76
GPC1-209ENST00000495100 NPIPB6E9PJ23 425 aa10.29□□□□□ -0.76
GPC1-209ENST00000495100 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
GPC1-209ENST00000495100 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
GPC1-209ENST00000495100 SAMD5Q5TGI4 173 aa10.29□□□□□ -0.76
GPC1-209ENST00000495100 NXT2Q9NPJ8 142 aaKnown RBP10.29□□□□□ -0.76
GPC1-209ENST00000495100 NIPBLQ6KC79 2804 aaeCLIP10.29□□□□□ -0.76
GPC1-209ENST00000495100 GCN1Q92616 2671 aaKnown RBP10.29□□□□□ -0.76
GPC1-209ENST00000495100 IGHV3-16A0A0C4DH30 117 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 K7ERU9 68 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 MRPS12O15235 138 aaKnown RBP10.28□□□□□ -0.76
GPC1-209ENST00000495100 C5orf56Q8N8D9 126 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 ITLN2Q8WWU7 325 aaPredicted RBP10.28□□□□□ -0.76
GPC1-209ENST00000495100 AJUBAQ96IF1 538 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 MS4A6AQ9H2W1 248 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
GPC1-209ENST00000495100 A0A1B0GW15 77 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 IGHG4P01861 327 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 OCIAD2Q56VL3 154 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 DPF1Q92782 380 aa10.28□□□□□ -0.76
GPC1-209ENST00000495100 SRSF1Q07955 248 aaKnown RBP eCLIP10.27□□□□□ -0.77
GPC1-209ENST00000495100 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
GPC1-209ENST00000495100 MXRA5Q9NR99 2828 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 ZNF815PA8K554 130 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 CD5LO43866 347 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 H3BMG7 143 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 HIST2H2BCQ6DN03 193 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 C2orf91Q6ZV80 131 aa10.27□□□□□ -0.77
GPC1-209ENST00000495100 MRPL16Q9NX20 251 aaKnown RBP10.27□□□□□ -0.77
GPC1-209ENST00000495100 IGHV3-38A0A0C4DH36 116 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 AVPP01185 164 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 TRBV7-1A0A0A6YYK4 115 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 TRAV8-2A0A0B4J237 113 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 GAGE1Q13065 139 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 C11orf71Q6IPW1 123 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
GPC1-209ENST00000495100 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
GPC1-209ENST00000495100 TRBV25-1A0A075B6N4 114 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 SLC25A16P16260 332 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 PSMB2P49721 201 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 SUMO2P61956 95 aaKnown RBP10.25□□□□□ -0.77
GPC1-209ENST00000495100 HSD52Q0P140 79 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 DEFB112Q30KQ8 113 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 GTSF1LQ9H1H1 148 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 CLPSL1A2RUU4 121 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 DUSP14O95147 198 aaKnown RBP10.25□□□□□ -0.77
GPC1-209ENST00000495100 RAB9AP51151 201 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 C1orf122Q6ZSJ8 110 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 UBE2E2Q96LR5 201 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
GPC1-209ENST00000495100 PPBPP02775 128 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 SRSF8Q9BRL6 282 aaKnown RBP10.24□□□□□ -0.77
GPC1-209ENST00000495100 PRSS29PA6NIE9 313 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 ATP5LO75964 103 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 MSMBP08118 114 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 HLA-DRB4P13762 266 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 COTL1Q14019 142 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 LGALS9BQ3B8N2 356 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 LGALS9CQ6DKI2 356 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 KIR2DL4Q99706 377 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 HLA-DRB4X5D2U9 266 aa10.24□□□□□ -0.77
GPC1-209ENST00000495100 MUC4Q99102 2169 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 ODF1Q14990 250 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 RAX2Q96IS3 184 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 MDFICQ9P1T7 246 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 A0A1B0GWB2 263 aa10.23□□□□□ -0.77
GPC1-209ENST00000495100 IGLC6P0CF74 106 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 P0DMU3 169 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 FAM231AP0DMU4 169 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 FAM231CP0DMU5 169 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 ID1P41134 155 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 ZNF876PQ49A33 203 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
GPC1-209ENST00000495100 DAZ1Q9NQZ3 744 aaKnown RBP10.22□□□□□ -0.77
GPC1-209ENST00000495100 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
GPC1-209ENST00000495100 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
GPC1-209ENST00000495100 C9orf139Q6ZV77 190 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms