RNA–Protein interactions for RNA: ENST00000494877.5

GABBR1-220, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 5

Gene GABBR1, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-220ENST00000494877 LINC01545Q5VT33 79 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 LINC01546A6NGU7 62 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 S100A4P26447 101 aaKnown RBP12.91□□□□□ -0.34
GABBR1-220ENST00000494877 ASIPP42127 132 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 VAMP3Q15836 100 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 ANXA2RQ3ZCQ2 193 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
GABBR1-220ENST00000494877 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
GABBR1-220ENST00000494877 KLLNB2CW77 178 aa12.9□□□□□ -0.34
GABBR1-220ENST00000494877 KIR3DS1Q14943 382 aa12.9□□□□□ -0.34
GABBR1-220ENST00000494877 H0Y8G0 127 aa12.89□□□□□ -0.35
GABBR1-220ENST00000494877 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
GABBR1-220ENST00000494877 SNRPD3P62318 126 aaKnown RBP12.89□□□□□ -0.35
GABBR1-220ENST00000494877 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
GABBR1-220ENST00000494877 TMEM86BQ8N661 226 aa12.89□□□□□ -0.35
GABBR1-220ENST00000494877 ST20Q9HBF5 79 aa12.89□□□□□ -0.35
GABBR1-220ENST00000494877 K7EQG2 157 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 K7ERU9 68 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 ZNF688P0C7X2 276 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 TSPOP30536 169 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 OR2K2Q8NGT1 345 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 UNC79Q9P2D8 2635 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 HECTD1Q9ULT8 2610 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 PSMG4Q5JS54 123 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 MCRIP2Q9BUT9 160 aaKnown RBP12.88□□□□□ -0.35
GABBR1-220ENST00000494877 SCRT2Q9NQ03 307 aa12.88□□□□□ -0.35
GABBR1-220ENST00000494877 PHLDA3Q9Y5J5 127 aa12.87□□□□□ -0.35
GABBR1-220ENST00000494877 SONP18583 2426 aaKnown RBP12.87□□□□□ -0.35
GABBR1-220ENST00000494877 FLNAP21333 2647 aaKnown RBP12.87□□□□□ -0.35
GABBR1-220ENST00000494877 FXYD7P58549 80 aa12.87□□□□□ -0.35
GABBR1-220ENST00000494877 DEFB125Q8N687 156 aa12.87□□□□□ -0.35
GABBR1-220ENST00000494877 ODF3Q96PU9 254 aa12.87□□□□□ -0.35
GABBR1-220ENST00000494877 ITPR2Q14571 2701 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 hDV102S1A0JD36 115 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 M0R381 172 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 NRACQ8N912 160 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 A0A1B0GV72 72 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 GNRH2O43555 120 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 Q8N8P6 123 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 MRAP2Q96G30 205 aa12.86□□□□□ -0.35
GABBR1-220ENST00000494877 A0A0J9YX75 114 aa12.85□□□□□ -0.35
GABBR1-220ENST00000494877 TRAV26-2A0A0B4J265 109 aa12.85□□□□□ -0.35
GABBR1-220ENST00000494877 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
GABBR1-220ENST00000494877 FCER1GP30273 86 aa12.85□□□□□ -0.35
GABBR1-220ENST00000494877 LEPP41159 167 aa12.85□□□□□ -0.35
GABBR1-220ENST00000494877 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
GABBR1-220ENST00000494877 PMCHL2Q9BQD1 86 aa12.85□□□□□ -0.35
GABBR1-220ENST00000494877 AKAP9Q99996 3911 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 IGLV2-18A0A075B6J9 118 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 FAM159AQ6UWV7 190 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 SORL1Q92673 2214 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 LGALS9CQ6DKI2 356 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 C18orf65Q6ZTR6 163 aa12.84□□□□□ -0.35
GABBR1-220ENST00000494877 PDZD2O15018 2839 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 SLURP1P55000 103 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 DEFB136Q30KP8 78 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 C7orf71A4D174 169 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 LINC01619G3V211 115 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 SPRY2O43597 315 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 SCGB1A1P11684 91 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 ADAMTSL5Q6ZMM2 481 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 C4orf3Q8WVX3 66 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 FOXC2Q99958 501 aa12.83□□□□□ -0.36
GABBR1-220ENST00000494877 ODF1Q14990 250 aa12.82□□□□□ -0.36
GABBR1-220ENST00000494877 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
GABBR1-220ENST00000494877 NXPH4O95158 308 aa12.81□□□□□ -0.36
GABBR1-220ENST00000494877 C14orf178Q8N769 122 aaPredicted RBP12.81□□□□□ -0.36
GABBR1-220ENST00000494877 DUSP14O95147 198 aaKnown RBP12.81□□□□□ -0.36
GABBR1-220ENST00000494877 OR11H1Q8NG94 326 aa12.81□□□□□ -0.36
GABBR1-220ENST00000494877 DPF1Q92782 380 aa12.81□□□□□ -0.36
GABBR1-220ENST00000494877 AGRNO00468 2067 aa12.81□□□□□ -0.36
GABBR1-220ENST00000494877 MUC4Q99102 2169 aa12.81□□□□□ -0.36
GABBR1-220ENST00000494877 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
GABBR1-220ENST00000494877 FOXI2Q6ZQN5 318 aa12.8□□□□□ -0.36
GABBR1-220ENST00000494877 Q6ZSV7 163 aa12.8□□□□□ -0.36
GABBR1-220ENST00000494877 OR1N2Q8NGR9 330 aa12.8□□□□□ -0.36
GABBR1-220ENST00000494877 PEMTQ9UBM1 199 aa12.8□□□□□ -0.36
GABBR1-220ENST00000494877 NOTCH2Q04721 2471 aa12.8□□□□□ -0.36
GABBR1-220ENST00000494877 DNAJC9-AS1A6NH13 148 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 IGKV3-20P01619 116 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 CD7P09564 240 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 LAGE3Q14657 143 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 KHDC1LQ5JSQ8 128 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 SLC25A34Q6PIV7 304 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 OR9G4Q8NGQ1 327 aa12.79□□□□□ -0.36
GABBR1-220ENST00000494877 CD5LO43866 347 aa12.78□□□□□ -0.36
GABBR1-220ENST00000494877 C18orf15Q96N68 181 aa12.78□□□□□ -0.36
GABBR1-220ENST00000494877 NF1P21359 2839 aa12.78□□□□□ -0.36
GABBR1-220ENST00000494877 RASL10AQ92737 203 aa12.78□□□□□ -0.36
GABBR1-220ENST00000494877 C20orf78Q9BR46 151 aa12.78□□□□□ -0.36
GABBR1-220ENST00000494877 SMIM2Q9BVW6 85 aa12.78□□□□□ -0.36
GABBR1-220ENST00000494877 TRAV12-2A0A075B6T6 113 aa12.77□□□□□ -0.36
GABBR1-220ENST00000494877 RIPPLY3P57055 190 aa12.77□□□□□ -0.36
GABBR1-220ENST00000494877 POM121L12Q8N7R1 296 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms