RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZFP2Q6ZN57 461 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 CYB561D1Q8N8Q1 229 aa11.52□□□□□ -0.57
NUP50-218ENST00000493456 RBM38Q9H0Z9 239 aaKnown RBP11.52□□□□□ -0.57
NUP50-218ENST00000493456 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
NUP50-218ENST00000493456 TAAR5O14804 337 aa11.51□□□□□ -0.57
NUP50-218ENST00000493456 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 A8MWV9 139 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 H2AFB2P0C5Z0 115 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
NUP50-218ENST00000493456 C14orf177Q52M58 125 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 PARLQ9H300 379 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 C11orf21Q9P2W6 132 aa11.5□□□□□ -0.57
NUP50-218ENST00000493456 RNASE3P12724 160 aaKnown RBP11.49□□□□□ -0.57
NUP50-218ENST00000493456 PIK3CD-AS1Q5SR53 167 aa11.49□□□□□ -0.57
NUP50-218ENST00000493456 OR10G9Q8NGN4 311 aa11.49□□□□□ -0.57
NUP50-218ENST00000493456 OR5AC2Q9NZP5 309 aa11.49□□□□□ -0.57
NUP50-218ENST00000493456 ZNF80P51504 273 aaPredicted RBP11.48□□□□□ -0.57
NUP50-218ENST00000493456 GNG5P63218 68 aa11.48□□□□□ -0.57
NUP50-218ENST00000493456 NIT1Q86X76 327 aa11.48□□□□□ -0.57
NUP50-218ENST00000493456 LINC00479Q96M42 142 aa11.48□□□□□ -0.57
NUP50-218ENST00000493456 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
NUP50-218ENST00000493456 KLK12Q9UKR0 248 aa11.48□□□□□ -0.57
NUP50-218ENST00000493456 TNXBP22105 4242 aa11.47□□□□□ -0.57
NUP50-218ENST00000493456 GCGP01275 180 aa11.47□□□□□ -0.57
NUP50-218ENST00000493456 ELOBQ15370 118 aa11.47□□□□□ -0.57
NUP50-218ENST00000493456 ZFP69Q49AA0 526 aa11.47□□□□□ -0.57
NUP50-218ENST00000493456 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
NUP50-218ENST00000493456 DAZAP1Q96EP5 407 aaKnown RBP11.47□□□□□ -0.57
NUP50-218ENST00000493456 DNAJC30Q96LL9 226 aa11.47□□□□□ -0.57
NUP50-218ENST00000493456 HNRNPA3P51991 378 aaKnown RBP11.46□□□□□ -0.57
NUP50-218ENST00000493456 LRRC37A5PQ49AS3 106 aa11.46□□□□□ -0.57
NUP50-218ENST00000493456 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.57
NUP50-218ENST00000493456 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
NUP50-218ENST00000493456 SGK494Q96LW2 274 aa11.46□□□□□ -0.57
NUP50-218ENST00000493456 A0A087WX48 190 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 K7EQM0 130 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 EIF3GO75821 320 aaKnown RBP eCLIP11.45□□□□□ -0.58
NUP50-218ENST00000493456 Q0VG73 95 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 SMUG1Q53HV7 270 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 SCGB1C1Q8TD33 95 aa11.45□□□□□ -0.58
NUP50-218ENST00000493456 FAM240BA0A1B0GVZ2 78 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 H0YIZ8 118 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
NUP50-218ENST00000493456 UFSP1Q6NVU6 142 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 C5orf17Q8NAS9 161 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 SAMD10Q9BYL1 202 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 Q9UF83 564 aa11.44□□□□□ -0.58
NUP50-218ENST00000493456 RHODO00212 210 aa11.43□□□□□ -0.58
NUP50-218ENST00000493456 SIX6O95475 246 aa11.43□□□□□ -0.58
NUP50-218ENST00000493456 TCRAP04437 139 aa11.43□□□□□ -0.58
NUP50-218ENST00000493456 MT1HL1P0DM35 61 aa11.43□□□□□ -0.58
NUP50-218ENST00000493456 S100A4P26447 101 aaKnown RBP11.43□□□□□ -0.58
NUP50-218ENST00000493456 CYCSP99999 105 aaKnown RBP11.43□□□□□ -0.58
NUP50-218ENST00000493456 C14orf178Q8N769 122 aaPredicted RBP11.43□□□□□ -0.58
NUP50-218ENST00000493456 PSG8Q9UQ74 426 aa11.43□□□□□ -0.58
NUP50-218ENST00000493456 HSPB11Q9Y547 144 aa11.43□□□□□ -0.58
NUP50-218ENST00000493456 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
NUP50-218ENST00000493456 ASIPP42127 132 aa11.41□□□□□ -0.58
NUP50-218ENST00000493456 FLI1Q01543 452 aaPredicted RBP11.41□□□□□ -0.58
NUP50-218ENST00000493456 DMRTA1Q5VZB9 504 aa11.41□□□□□ -0.58
NUP50-218ENST00000493456 Q6ZRU5 148 aa11.41□□□□□ -0.58
NUP50-218ENST00000493456 SAPCD1Q5SSQ6 148 aa11.4□□□□□ -0.58
NUP50-218ENST00000493456 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.58
NUP50-218ENST00000493456 OR2G3Q8NGZ4 309 aa11.4□□□□□ -0.58
NUP50-218ENST00000493456 CCDC32Q9BV29 185 aa11.4□□□□□ -0.58
NUP50-218ENST00000493456 IL36BQ9NZH7 164 aa11.4□□□□□ -0.58
NUP50-218ENST00000493456 PET100P0DJ07 73 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 ARL14EPLP0DKL9 152 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 MZT2BQ6NZ67 158 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 PPP1R1CQ8WVI7 109 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 JPT2Q9H910 190 aa11.39□□□□□ -0.59
NUP50-218ENST00000493456 IGKV3D-20A0A0C4DH25 116 aa11.38□□□□□ -0.59
NUP50-218ENST00000493456 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
NUP50-218ENST00000493456 CRPP02741 224 aa11.38□□□□□ -0.59
NUP50-218ENST00000493456 RAB2AP61019 212 aa11.38□□□□□ -0.59
NUP50-218ENST00000493456 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
NUP50-218ENST00000493456 TRBV10-1A0A0K0K1A3 114 aa11.37□□□□□ -0.59
NUP50-218ENST00000493456 USP17L23D6RBM5 183 aa11.37□□□□□ -0.59
NUP50-218ENST00000493456 RPL12P30050 165 aaKnown RBP11.37□□□□□ -0.59
NUP50-218ENST00000493456 SUN5Q8TC36 379 aa11.37□□□□□ -0.59
NUP50-218ENST00000493456 A0A0D9SG52 128 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 STAG3L2P0CL84 134 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 STAG3L3P0CL85 134 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
NUP50-218ENST00000493456 FAM74A4Q5TZK3 123 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 C9orf163Q8N9P6 203 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 ZC2HC1AQ96GY0 325 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 EPDR1Q9UM22 224 aa11.36□□□□□ -0.59
NUP50-218ENST00000493456 FABP5P3A8MUU1 101 aa11.35□□□□□ -0.59
NUP50-218ENST00000493456 H3BVH4 76 aa11.35□□□□□ -0.59
NUP50-218ENST00000493456 MPC2O95563 127 aa11.35□□□□□ -0.59
NUP50-218ENST00000493456 HLA-DQA1P01909 254 aa11.35□□□□□ -0.59
NUP50-218ENST00000493456 H2BFSP57053 126 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms