RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 IGKV1-39P01597 117 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 HLA-DQB1P01920 261 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 IGKV1D-39P04432 117 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 CELP19835 753 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 TAS2R43P59537 309 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 VAMP3Q15836 100 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 C9orf116Q5BN46 136 aaPredicted RBP1.81□□□□□ -2.12
UBR4-215ENST00000492606 ERICH5Q6P6B1 374 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 RASSF6Q6ZTQ3 369 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 SLC7A5P1Q8MH63 180 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 SLC25A29Q8N8R3 303 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 SPANXA2-OT1Q8N9U9 137 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 OR8A1Q8NGG7 326 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 LGALS14Q8TCE9 139 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 SLC50A1Q9BRV3 221 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 RSG1Q9BU20 258 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 FAM107BQ9H098 131 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 DCSTAMPQ9H295 470 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 SNX12Q9UMY4 172 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 ENPP4Q9Y6X5 453 aa1.81□□□□□ -2.12
UBR4-215ENST00000492606 PGPA6NDG6 321 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 UPK1BO75841 260 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 CRPP02741 224 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 OR5AL1P0C617 328 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 GTF2F2P13984 249 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 PSMA1P25786 263 aaKnown RBP1.8□□□□□ -2.12
UBR4-215ENST00000492606 HLA-DRB3P79483 266 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 IFITM3Q01628 133 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 ELOBQ15370 118 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 AADACL3Q5VUY0 350 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 GLYATQ6IB77 296 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 EIF4E3Q8N5X7 224 aaKnown RBP1.8□□□□□ -2.12
UBR4-215ENST00000492606 SLC35G3Q8N808 338 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 MNS1Q8NEH6 495 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 OR1L8Q8NGR8 309 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 LSM10Q969L4 123 aaKnown RBP1.8□□□□□ -2.12
UBR4-215ENST00000492606 FAAP24Q9BTP7 215 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 TP73-AS1Q9UF72 201 aa1.8□□□□□ -2.12
UBR4-215ENST00000492606 A0A087WX48 190 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 TRAV8-4A0A0B4J246 113 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 FAM240AA0A1B0GVK7 77 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 A8MUU9 505 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 GATCO43716 136 aaKnown RBP1.79□□□□□ -2.12
UBR4-215ENST00000492606 PDCD6O75340 191 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 P01737 135 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 IL4P05112 153 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 HLA-DMAP28067 261 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 RPL14P50914 215 aaKnown RBP1.79□□□□□ -2.12
UBR4-215ENST00000492606 MIAQ16674 131 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 THOC7Q6I9Y2 204 aaKnown RBP1.79□□□□□ -2.12
UBR4-215ENST00000492606 CLPSL2Q6UWE3 100 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 LINC00469Q8N7U9 141 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 ENKURQ8TC29 256 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 ZFAND1Q8TCF1 268 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 GNPDA2Q8TDQ7 276 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 TMEM56Q96MV1 263 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 CGREF1Q99674 301 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 PECRQ9BY49 303 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 BANF2Q9H503 90 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 SND1-IT1Q9HBX3 110 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 RHBDL2Q9NX52 303 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 ARL2BPQ9Y2Y0 163 aa1.79□□□□□ -2.12
UBR4-215ENST00000492606 TRAV4A0A0B4J268 109 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 FABP12A6NFH5 140 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 C9orf92A6NGG3 77 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 ERICH4A6NGS2 130 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 COPEO14579 308 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 BET1O15155 118 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 GSTZ1O43708 216 aaPredicted RBP1.78□□□□□ -2.12
UBR4-215ENST00000492606 HRASP01112 189 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 LINC00694P0DN24 101 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 CASQ1P31415 396 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 TGFBR1P36897 503 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 TMED1Q13445 227 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 GUK1Q16774 197 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 WHAMMP3Q1A5X7 153 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 HSP90B2PQ58FF3 399 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 TMEM244Q5VVB8 128 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 RPL13AP3Q6NVV1 102 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 PRNTQ86SH4 94 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 CROCCP2Q86T23 111 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 LRRC20Q8TCA0 184 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 ZNF431Q8TF32 576 aaPredicted RBP1.78□□□□□ -2.12
UBR4-215ENST00000492606 DERL3Q96Q80 235 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 CHCHD7Q9BUK0 85 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 BAIAP2Q9UQB8 552 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 CBY1Q9Y3M2 126 aa1.78□□□□□ -2.12
UBR4-215ENST00000492606 LINC00854A0A1B0GVQ3 168 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 A0A1B0GW15 77 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 C20orf202A1L168 122 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 NDUFS5O43920 106 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 PTHLHP12272 177 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 NTF3P20783 257 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 QRFPP83859 136 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 CAV1Q03135 178 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 EIF5AL1Q6IS14 154 aaKnown RBP1.77□□□□□ -2.13
UBR4-215ENST00000492606 C6orf201Q7Z4U5 140 aa1.77□□□□□ -2.13
UBR4-215ENST00000492606 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms