RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 RITA1Q96K30 269 aa11.46□□□□□ -0.58
EPHB4-206ENST00000487222 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.58
EPHB4-206ENST00000487222 VPREB3Q9UKI3 123 aa11.46□□□□□ -0.58
EPHB4-206ENST00000487222 J3QKU1 62 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 BUB3O43684 328 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 U3KQE9 123 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 IGHG4P01861 327 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 RPL32P62910 135 aaKnown RBP11.45□□□□□ -0.58
EPHB4-206ENST00000487222 DEFB112Q30KQ8 113 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 SPRY4Q9C004 299 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 IGLL5B9A064 214 aa11.45□□□□□ -0.58
EPHB4-206ENST00000487222 IGLV2-14P01704 120 aa11.44□□□□□ -0.58
EPHB4-206ENST00000487222 IGHV4-59P01825 116 aa11.44□□□□□ -0.58
EPHB4-206ENST00000487222 RBMY1FQ15415 496 aaKnown RBP11.44□□□□□ -0.58
EPHB4-206ENST00000487222 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
EPHB4-206ENST00000487222 RPL39LQ96EH5 51 aaKnown RBP11.44□□□□□ -0.58
EPHB4-206ENST00000487222 TMEM126AQ9H061 195 aa11.44□□□□□ -0.58
EPHB4-206ENST00000487222 Q9H8V8 135 aa11.44□□□□□ -0.58
EPHB4-206ENST00000487222 ANGP03950 147 aaKnown RBP11.44□□□□□ -0.58
EPHB4-206ENST00000487222 PLXNB3Q9ULL4 1909 aa11.44□□□□□ -0.58
EPHB4-206ENST00000487222 IGKV1OR2-108A0A075B7D4 117 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 PRSS47A8MTI9 375 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 SPRY2O43597 315 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.43□□□□□ -0.58
EPHB4-206ENST00000487222 IGKV2-29A2NJV5 120 aaPredicted RBP11.43□□□□□ -0.58
EPHB4-206ENST00000487222 SUMO4Q6EEV6 95 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 DSCR8Q96T75 97 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 HERV-K104P63124 156 aa11.43□□□□□ -0.58
EPHB4-206ENST00000487222 C16orf54Q6UWD8 224 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 SLC25A29Q8N8R3 303 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 WI2-2373I1.2A0A1W2PRP0 233 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 ZFP2Q6ZN57 461 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 NOP10Q9NPE3 64 aaKnown RBP11.42□□□□□ -0.58
EPHB4-206ENST00000487222 DYSFO75923 2080 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 AJUBAQ96IF1 538 aa11.42□□□□□ -0.58
EPHB4-206ENST00000487222 CHD3Q12873 2000 aaKnown RBP11.41□□□□□ -0.58
EPHB4-206ENST00000487222 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 Q8N9W7 124 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 A0A1W2PNU3 283 aaPredicted RBP11.41□□□□□ -0.58
EPHB4-206ENST00000487222 TEX22C9J3V5 150 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 CRYGCP07315 174 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 TRAV25A0A0B4J276 109 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 HIGD1BQ9P298 99 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
EPHB4-206ENST00000487222 TEX48A0A1B0GUV7 120 aa11.4□□□□□ -0.58
EPHB4-206ENST00000487222 ODF3L1Q8IXM7 274 aa11.4□□□□□ -0.58
EPHB4-206ENST00000487222 KIF26AQ9ULI4 1882 aaPredicted RBP11.4□□□□□ -0.58
EPHB4-206ENST00000487222 A0A0J9YXV3 536 aa11.4□□□□□ -0.59
EPHB4-206ENST00000487222 TINCRA0A1B0GVN0 87 aa11.4□□□□□ -0.59
EPHB4-206ENST00000487222 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.59
EPHB4-206ENST00000487222 A0A096LPF7 62 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 CRYBA4P53673 196 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 FREM1Q5H8C1 2179 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 TRBV6-1A0A0K0K1D8 114 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 CSPG4Q6UVK1 2322 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 CTRLP40313 264 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 XCL1P47992 114 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 C9orf47Q6ZRZ4 202 aa11.39□□□□□ -0.59
EPHB4-206ENST00000487222 MRPL36Q9P0J6 103 aaKnown RBP11.39□□□□□ -0.59
EPHB4-206ENST00000487222 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 BLCAPP62952 87 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 TRACP01848 142 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 ACYP1P07311 99 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 CLPSL2Q6UWE3 100 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 RMI2Q96E14 147 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 SEM1Q6ZVN7 128 aa11.38□□□□□ -0.59
EPHB4-206ENST00000487222 A4D1N5 150 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 CCL24O00175 119 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 E7EUB6 86 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 FXYD2P54710 66 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 P0C879 139 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 IGHV4-38-2P0DP08 117 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 DEFB136Q30KP8 78 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 C5orf56Q8N8D9 126 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 RNASE8Q8TDE3 154 aaKnown RBP11.37□□□□□ -0.59
EPHB4-206ENST00000487222 ORMDL1Q9P0S3 153 aa11.37□□□□□ -0.59
EPHB4-206ENST00000487222 MUSTN1Q8IVN3 82 aa11.36□□□□□ -0.59
EPHB4-206ENST00000487222 FRMD6-AS1P0C7T7 363 aa11.36□□□□□ -0.59
EPHB4-206ENST00000487222 MED14OSP0DP75 135 aa11.36□□□□□ -0.59
EPHB4-206ENST00000487222 C19orf71A6NCJ1 209 aa11.36□□□□□ -0.59
EPHB4-206ENST00000487222 COL4A3Q01955 1670 aa11.36□□□□□ -0.59
EPHB4-206ENST00000487222 APRG1Q8IVJ8 170 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 K7EMT4 169 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 C5orf38Q86SI9 138 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 TTTY13Q9BZ97 58 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 C2orf16Q68DN1 1984 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 SLURP1P55000 103 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 TIMM17AQ99595 171 aa11.35□□□□□ -0.59
EPHB4-206ENST00000487222 ADORA2A-AS1P86434 159 aa11.34□□□□□ -0.59
EPHB4-206ENST00000487222 TEN1Q86WV5 123 aa11.34□□□□□ -0.59
EPHB4-206ENST00000487222 E9PLD3 99 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms