RNA–Protein interactions for RNA: ENST00000487065.5

STAG1-208, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 2,914 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-208ENST00000487065 RNASE7Q9H1E1 156 aaKnown RBP5.39□□□□□ -1.55
STAG1-208ENST00000487065 TRAPPC1Q9Y5R8 145 aa5.39□□□□□ -1.55
STAG1-208ENST00000487065 LOC102724200A0A096LPH7 203 aaPredicted RBP5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 ASIPP42127 132 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
STAG1-208ENST00000487065 FAM104BQ5XKR9 115 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 TMEM88Q6PEY1 159 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 TMEM61Q8N0U2 210 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 LINC00479Q96M42 142 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 LYSTQ99698 3801 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 TRAV34A0A0B4J273 112 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 IGKV3D-20A0A0C4DH25 116 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 INSP01308 110 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 SYT8Q8NBV8 401 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 OVOL2Q9BRP0 275 aa5.38□□□□□ -1.55
STAG1-208ENST00000487065 IGHV1OR15-1A0A075B7D0 117 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 RHODO00212 210 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 SMIM6P0DI80 62 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 DAZ2Q13117 558 aaKnown RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 CEMP1Q6PRD7 247 aaPredicted RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 C8orf49Q96NF6 230 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 MRPL18Q9H0U6 180 aaKnown RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 IGHV3-16A0A0C4DH30 117 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 OR11H12B2RN74 326 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 APCSP02743 223 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 GPX1P07203 203 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 ZNF80P51504 273 aaPredicted RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 ODF3L2Q3SX64 289 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 DNAJC30Q96LL9 226 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 ALKBH7Q9BT30 221 aaPredicted RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 HUWE1Q7Z6Z7 4374 aaKnown RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 CRXO43186 299 aaPredicted RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 CDK2AP2O75956 126 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 RPS10P46783 165 aaKnown RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 CD300EQ496F6 205 aaPredicted RBP5.37□□□□□ -1.55
STAG1-208ENST00000487065 SMIM15Q7Z3B0 74 aa5.37□□□□□ -1.55
STAG1-208ENST00000487065 A0A1B0GV90 55 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 CRYBA4P53673 196 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 ZNF705AQ6ZN79 300 aaPredicted RBP5.36□□□□□ -1.55
STAG1-208ENST00000487065 KIF25-AS1Q9Y6Z4 181 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 TRAV8-1A0A0A6YYK1 113 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 TCL1AP56279 114 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 ZNF415Q09FC8 603 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 UFSP1Q6NVU6 142 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 SPATA12Q7Z6I5 190 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 DPH3P1Q9H4G8 78 aa5.36□□□□□ -1.55
STAG1-208ENST00000487065 NXT2Q9NPJ8 142 aaKnown RBP5.36□□□□□ -1.55
STAG1-208ENST00000487065 ZNF705FA8MVS1 300 aaPredicted RBP5.35□□□□□ -1.55
STAG1-208ENST00000487065 A8MWV9 139 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 ZNF705DP0CH99 300 aaPredicted RBP5.35□□□□□ -1.55
STAG1-208ENST00000487065 ZNF705BP0CI00 300 aaPredicted RBP5.35□□□□□ -1.55
STAG1-208ENST00000487065 IGHV4-30-4P0DP06 118 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 HIST3H2BBQ8N257 126 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 RNF182Q8N6D2 247 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 AP1S3Q96PC3 154 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 SVEP1Q4LDE5 3571 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
STAG1-208ENST00000487065 TGP01266 2768 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 SNURFLB1AK76 121 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 TRGC2P03986 189 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 RNASE3P12724 160 aaKnown RBP5.35□□□□□ -1.55
STAG1-208ENST00000487065 HLA-DMBP28068 263 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 GFI1BQ5VTD9 330 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 PRR27Q6MZM9 219 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 C11orf44Q8N8P7 122 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 CSNK1G2-AS1Q8NCQ2 148 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 RASL10AQ92737 203 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 C11orf68Q9H3H3 251 aaKnown RBP5.35□□□□□ -1.55
STAG1-208ENST00000487065 NAGKQ9UJ70 344 aa5.35□□□□□ -1.55
STAG1-208ENST00000487065 EIF3GO75821 320 aaKnown RBP eCLIP5.34□□□□□ -1.55
STAG1-208ENST00000487065 NCR2O95944 276 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 RAB4BP61018 213 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 SNRPEP62304 92 aaKnown RBP5.34□□□□□ -1.55
STAG1-208ENST00000487065 LYZL1Q6UWQ5 148 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 FAM159AQ6UWV7 190 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 C18orf65Q6ZTR6 163 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 RNF185Q96GF1 192 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 C16orf74Q96GX8 76 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 C12orf57Q99622 126 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 C11orf21Q9P2W6 132 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 A0A1W2PRX2 142 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 ERCC8Q13216 396 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 PRR9Q5T870 116 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 ORMDL3Q8N138 153 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 TMEM263Q8WUH6 116 aaKnown RBP5.34□□□□□ -1.55
STAG1-208ENST00000487065 TMEM18Q96B42 140 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 GOLT1BQ9Y3E0 138 aa5.34□□□□□ -1.55
STAG1-208ENST00000487065 C20orf202A1L168 122 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms