RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PRNTQ86SH4 94 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 ARL6IP6Q8N6S5 226 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 SLC25A29Q8N8R3 303 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 SH3BGRL3Q9H299 93 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 PSG8Q9UQ74 426 aa7.12□□□□□ -1.27
HMGN1-215ENST00000485550 IGHV3-38A0A0C4DH36 116 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 PGPEP1LA6NFU8 196 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 FBLL1A6NHQ2 334 aaKnown RBP7.11□□□□□ -1.27
HMGN1-215ENST00000485550 TAAR5O14804 337 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 RS1O15537 224 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 OR10J3Q5JRS4 329 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 C5orf17Q8NAS9 161 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 MED28Q9H204 178 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 EPDR1Q9UM22 224 aa7.11□□□□□ -1.27
HMGN1-215ENST00000485550 TRAV34A0A0B4J273 112 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 SERTM2A0A1B0GWG4 89 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 GGTLC3B5MD39 225 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 K7EQM0 130 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 PSCAO43653 123 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 IGLV2-11P01706 119 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 IGHV3-30P01768 117 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 IGHV3-33P01772 117 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 IGHV3-30-3P0DP02 117 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 IGHV3-30-5P0DP03 117 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 FLI1Q01543 452 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-215ENST00000485550 SMUG1Q53HV7 270 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 C10orf126Q8N4M7 172 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 OR2G3Q8NGZ4 309 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 LINC00479Q96M42 142 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 AQP10Q96PS8 301 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 PSMG3Q9BT73 122 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-215ENST00000485550 ACTR3CQ9C0K3 210 aaPredicted RBP7.1□□□□□ -1.27
HMGN1-215ENST00000485550 Q9HAA7 133 aa7.1□□□□□ -1.27
HMGN1-215ENST00000485550 TRAV8-6A0A0B4J262 113 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 K7EP13 123 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 CXorf1O96002 111 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 MBP02144 154 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.27
HMGN1-215ENST00000485550 RNASE3P12724 160 aaKnown RBP7.09□□□□□ -1.27
HMGN1-215ENST00000485550 GCSHP23434 173 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 RHOHQ15669 191 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 ZFP69Q49AA0 526 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 ZNF506Q5JVG8 444 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 RPL7L1Q6DKI1 246 aaKnown RBP7.09□□□□□ -1.27
HMGN1-215ENST00000485550 SH2D6Q7Z4S9 175 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 CYB561D1Q8N8Q1 229 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 SUN5Q8TC36 379 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 C9orf85Q96MD7 179 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 TMEM167BQ9NRX6 74 aa7.09□□□□□ -1.27
HMGN1-215ENST00000485550 TRBV6-4A0A1B0GX49 114 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 KRTAP29-1A8MX34 341 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-215ENST00000485550 IFNA7P01567 189 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 TIRAPP58753 221 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 UBE2G2P60604 165 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 SERF2P84101 59 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 SYT8Q8NBV8 401 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 TNFSF18Q9UNG2 199 aa7.08□□□□□ -1.28
HMGN1-215ENST00000485550 FXYD6-FXYD2A0A087WZ82 144 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 IGKV3D-20A0A0C4DH25 116 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 GAGE12JA6NER3 117 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 IBA57-AS1B1ANH7 110 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 S100A4P26447 101 aaKnown RBP7.07□□□□□ -1.28
HMGN1-215ENST00000485550 FGF8P55075 233 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-215ENST00000485550 GAGE1Q13065 139 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 GAGE4Q13068 117 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 GAGE5Q13069 117 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 ZNF726P1Q15940 193 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 LGALSLQ3ZCW2 172 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-215ENST00000485550 GAGE13Q4V321 117 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 INO80EQ8NBZ0 244 aaPredicted RBP7.07□□□□□ -1.28
HMGN1-215ENST00000485550 OR2T35Q8NGX2 323 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 JPT2Q9H910 190 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 ARL2-SNX15V9GYD0 113 aa7.07□□□□□ -1.28
HMGN1-215ENST00000485550 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 RNF222A6NCQ9 220 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 CIDEAO60543 219 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 PTTG1O95997 202 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 MGST1P10620 155 aaKnown RBP7.06□□□□□ -1.28
HMGN1-215ENST00000485550 LELP1Q5T871 98 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 GTSF1LQ9H1H1 148 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 PARLQ9H300 379 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 Q9UF83 564 aa7.06□□□□□ -1.28
HMGN1-215ENST00000485550 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
HMGN1-215ENST00000485550 HMCN2Q8NDA2 5059 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 BORCS7-ASMTA0A0B4J1R7 106 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 A0A1W2PRE2 83 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 GIPP09681 153 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-215ENST00000485550 PTH2Q96A98 100 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 SAMD10Q9BYL1 202 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 BATF3Q9NR55 127 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
HMGN1-215ENST00000485550 CTXND1A0A1B0GTU2 59 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms