RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 TEX15Q9BXT5 2789 aa12.33□□□□□ -0.44
PCCB-217ENST00000484181 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 PRSS47A8MTI9 375 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 GNRH2O43555 120 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 RNASE3P12724 160 aaKnown RBP12.32□□□□□ -0.44
PCCB-217ENST00000484181 SPINK13Q1W4C9 94 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 SPATA45Q537H7 98 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
PCCB-217ENST00000484181 Q8N8P6 123 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 CITED2Q99967 270 aaPredicted RBP12.32□□□□□ -0.44
PCCB-217ENST00000484181 A8MTW9 85 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 ZNF747Q9BV97 191 aa12.32□□□□□ -0.44
PCCB-217ENST00000484181 PDZD2O15018 2839 aa12.31□□□□□ -0.44
PCCB-217ENST00000484181 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
PCCB-217ENST00000484181 HSBP1L1C9JCN9 74 aa12.31□□□□□ -0.44
PCCB-217ENST00000484181 CMC4P56277 68 aaPredicted RBP12.31□□□□□ -0.44
PCCB-217ENST00000484181 AMTNQ6UX39 209 aa12.31□□□□□ -0.44
PCCB-217ENST00000484181 SPATA12Q7Z6I5 190 aa12.31□□□□□ -0.44
PCCB-217ENST00000484181 MAP6D1Q9H9H5 199 aa12.31□□□□□ -0.44
PCCB-217ENST00000484181 LY6G6DO95868 133 aa12.3□□□□□ -0.44
PCCB-217ENST00000484181 CD300EQ496F6 205 aaPredicted RBP12.3□□□□□ -0.44
PCCB-217ENST00000484181 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
PCCB-217ENST00000484181 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
PCCB-217ENST00000484181 FLNAP21333 2647 aaKnown RBP12.3□□□□□ -0.44
PCCB-217ENST00000484181 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 H3BMM0 161 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 K7EMI3 77 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 C14orf178Q8N769 122 aaPredicted RBP12.29□□□□□ -0.44
PCCB-217ENST00000484181 C20orf78Q9BR46 151 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 HELZ2Q9BYK8 2649 aaKnown RBP12.29□□□□□ -0.44
PCCB-217ENST00000484181 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 KNCNA6PVL3 124 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 MGPP08493 103 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
PCCB-217ENST00000484181 NRACQ8N912 160 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 CLUHP3Q96NS8 147 aa12.29□□□□□ -0.44
PCCB-217ENST00000484181 MXRA5Q9NR99 2828 aa12.28□□□□□ -0.44
PCCB-217ENST00000484181 FCER1GP30273 86 aa12.28□□□□□ -0.44
PCCB-217ENST00000484181 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
PCCB-217ENST00000484181 C14orf144Q96I85 54 aa12.28□□□□□ -0.44
PCCB-217ENST00000484181 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
PCCB-217ENST00000484181 CCDC168Q8NDH2 2452 aa12.28□□□□□ -0.44
PCCB-217ENST00000484181 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.44
PCCB-217ENST00000484181 LINC01545Q5VT33 79 aa12.27□□□□□ -0.45
PCCB-217ENST00000484181 LINC00173Q6ZV60 143 aa12.27□□□□□ -0.45
PCCB-217ENST00000484181 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
PCCB-217ENST00000484181 A0A096LNJ9 63 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 TRAV26-2A0A0B4J265 109 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 FOSL1P15407 271 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 LAGE3Q14657 143 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 Q8N1Y9 231 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 SMR3AQ99954 134 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 SMIM2Q9BVW6 85 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 CBY3A6NI87 242 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 H0Y8G0 127 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 GATA1P15976 413 aaPredicted RBP12.26□□□□□ -0.45
PCCB-217ENST00000484181 PROK1P58294 105 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
PCCB-217ENST00000484181 CTAG1AP78358 180 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 ATOH7Q8N100 152 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 IFI27L1Q96BM0 104 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 ST20Q9HBF5 79 aa12.26□□□□□ -0.45
PCCB-217ENST00000484181 OR11H12B2RN74 326 aa12.25□□□□□ -0.45
PCCB-217ENST00000484181 INSP01308 110 aa12.25□□□□□ -0.45
PCCB-217ENST00000484181 ORMDL2Q53FV1 153 aa12.25□□□□□ -0.45
PCCB-217ENST00000484181 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
PCCB-217ENST00000484181 ATP5LO75964 103 aa12.24□□□□□ -0.45
PCCB-217ENST00000484181 GAS8-AS1O95177 125 aa12.24□□□□□ -0.45
PCCB-217ENST00000484181 LGALS9BQ3B8N2 356 aa12.24□□□□□ -0.45
PCCB-217ENST00000484181 LGALS9CQ6DKI2 356 aa12.24□□□□□ -0.45
PCCB-217ENST00000484181 NDUFA11Q86Y39 141 aa12.24□□□□□ -0.45
PCCB-217ENST00000484181 IGLV2-18A0A075B6J9 118 aa12.23□□□□□ -0.45
PCCB-217ENST00000484181 SAP30O75446 220 aa12.23□□□□□ -0.45
PCCB-217ENST00000484181 G0S2P27469 103 aa12.23□□□□□ -0.45
PCCB-217ENST00000484181 STHQ8IWL8 128 aa12.23□□□□□ -0.45
PCCB-217ENST00000484181 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
PCCB-217ENST00000484181 NBPF19A0A087WUL8 3843 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 IGLC3P0DOY3 106 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 NUTF2P61970 127 aaKnown RBP12.22□□□□□ -0.45
PCCB-217ENST00000484181 RPL32P62910 135 aaKnown RBP12.22□□□□□ -0.45
PCCB-217ENST00000484181 ZNF415Q09FC8 603 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 RASL10AQ92737 203 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 KIF25-AS1Q9Y6Z4 181 aa12.22□□□□□ -0.45
PCCB-217ENST00000484181 F5H697 171 aa12.21□□□□□ -0.45
PCCB-217ENST00000484181 M0R143 59 aa12.21□□□□□ -0.45
PCCB-217ENST00000484181 FXYD7P58549 80 aa12.21□□□□□ -0.45
PCCB-217ENST00000484181 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.45
PCCB-217ENST00000484181 FAM110AQ9BQ89 295 aa12.21□□□□□ -0.45
PCCB-217ENST00000484181 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
PCCB-217ENST00000484181 SPRY2O43597 315 aa12.2□□□□□ -0.46
PCCB-217ENST00000484181 NUDT3O95989 172 aa12.2□□□□□ -0.46
PCCB-217ENST00000484181 HNRNPA3P51991 378 aaKnown RBP12.2□□□□□ -0.46
PCCB-217ENST00000484181 NSUN5P1Q3KNT7 163 aa12.2□□□□□ -0.46
PCCB-217ENST00000484181 ODF3L2Q3SX64 289 aa12.2□□□□□ -0.46
PCCB-217ENST00000484181 HIST2H2BDQ6DRA6 164 aa12.2□□□□□ -0.46
PCCB-217ENST00000484181 TLN2Q9Y4G6 2542 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms