RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.93
VARS-226ENST00000483275 SLC25A29Q8N8R3 303 aa9.27□□□□□ -0.93
VARS-226ENST00000483275 ZNF471Q9BX82 626 aaPredicted RBP9.27□□□□□ -0.93
VARS-226ENST00000483275 CTXND1A0A1B0GTU2 59 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 FBLL1A6NHQ2 334 aaKnown RBP9.26□□□□□ -0.93
VARS-226ENST00000483275 IBA57-AS1B1ANH7 110 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 GCHFRP30047 84 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 OR11H4Q8NGC9 324 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
VARS-226ENST00000483275 SDF2L1Q9HCN8 221 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 TREM1Q9NP99 234 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 CYTL1Q9NRR1 136 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 C11orf21Q9P2W6 132 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
VARS-226ENST00000483275 TRAV21A0A0B4J279 112 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 K7EQM0 130 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 BCL2L11O43521 198 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 LINC01620Q4KN68 170 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 Q6ZNX1 250 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 ARL6IP6Q8N6S5 226 aa9.25□□□□□ -0.93
VARS-226ENST00000483275 TRAV8-6A0A0B4J262 113 aa9.24□□□□□ -0.93
VARS-226ENST00000483275 ZNF80P51504 273 aaPredicted RBP9.24□□□□□ -0.93
VARS-226ENST00000483275 TIRAPP58753 221 aa9.24□□□□□ -0.93
VARS-226ENST00000483275 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
VARS-226ENST00000483275 STOML3Q8TAV4 291 aa9.24□□□□□ -0.93
VARS-226ENST00000483275 TMED6Q8WW62 240 aa9.24□□□□□ -0.93
VARS-226ENST00000483275 hCG_2014768A0A024R1R8 64 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.23□□□□□ -0.93
VARS-226ENST00000483275 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 SEC11BP0C7V7 166 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 TPT1P13693 172 aaKnown RBP9.23□□□□□ -0.93
VARS-226ENST00000483275 TMUB2Q71RG4 321 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 SH2D6Q7Z4S9 175 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 TCTE3Q8IZS6 198 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 LINC00528Q8N1L1 170 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 NDFIP1Q9BT67 221 aa9.23□□□□□ -0.93
VARS-226ENST00000483275 MAP1LC3B2A6NCE7 125 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 RS1O15537 224 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 PFN1P07737 140 aaKnown RBP9.22□□□□□ -0.93
VARS-226ENST00000483275 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
VARS-226ENST00000483275 RHOHQ15669 191 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 ZNF506Q5JVG8 444 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 LELP1Q5T871 98 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 SUN5Q8TC36 379 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 PRADC1Q9BSG0 188 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 MAP1LC3BQ9GZQ8 125 aa9.22□□□□□ -0.93
VARS-226ENST00000483275 PGPEP1LA6NFU8 196 aa9.21□□□□□ -0.94
VARS-226ENST00000483275 FGF8P55075 233 aaPredicted RBP9.21□□□□□ -0.94
VARS-226ENST00000483275 ZNF726P1Q15940 193 aa9.21□□□□□ -0.94
VARS-226ENST00000483275 Q9UF83 564 aa9.21□□□□□ -0.94
VARS-226ENST00000483275 A0A1W2PRE2 83 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 IFNA7P01567 189 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 C1QBP02746 253 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 TCRAP04437 139 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 UBE2G2P60604 165 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 EIF5AL1Q6IS14 154 aaKnown RBP9.2□□□□□ -0.94
VARS-226ENST00000483275 DAZ4Q86SG3 579 aaKnown RBP9.2□□□□□ -0.94
VARS-226ENST00000483275 ATP6V0E2Q8NHE4 81 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 FAM213BQ8TBF2 198 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 KCNS1Q96KK3 526 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 DNAJC30Q96LL9 226 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 C9orf85Q96MD7 179 aa9.2□□□□□ -0.94
VARS-226ENST00000483275 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
VARS-226ENST00000483275 DAZ3Q9NR90 486 aaKnown RBP9.2□□□□□ -0.94
VARS-226ENST00000483275 TRBV6-4A0A1B0GX49 114 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GAGE12JA6NER3 117 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GCGP01275 180 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GAGE1Q13065 139 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GAGE4Q13068 117 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GAGE5Q13069 117 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GAGE13Q4V321 117 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 Q6ZSA8 131 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 GTSF1LQ9H1H1 148 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
VARS-226ENST00000483275 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
VARS-226ENST00000483275 GGTLC3B5MD39 225 aa9.18□□□□□ -0.94
VARS-226ENST00000483275 RNASE3P12724 160 aaKnown RBP9.18□□□□□ -0.94
VARS-226ENST00000483275 ZFP69Q49AA0 526 aa9.18□□□□□ -0.94
VARS-226ENST00000483275 SCXQ7RTU7 201 aa9.18□□□□□ -0.94
VARS-226ENST00000483275 SFT2D1Q8WV19 159 aa9.18□□□□□ -0.94
VARS-226ENST00000483275 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
VARS-226ENST00000483275 PKHD1L1Q86WI1 4243 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 IGLV2-11P01706 119 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 PLA2G1BP04054 148 aaKnown RBP9.17□□□□□ -0.94
VARS-226ENST00000483275 FLI1Q01543 452 aaPredicted RBP9.17□□□□□ -0.94
VARS-226ENST00000483275 LAGE3Q14657 143 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 LGALSLQ3ZCW2 172 aaPredicted RBP9.17□□□□□ -0.94
VARS-226ENST00000483275 CST9LP1Q5W188 147 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 PRNTQ86SH4 94 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 JPT2Q9H910 190 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 PSG8Q9UQ74 426 aa9.17□□□□□ -0.94
VARS-226ENST00000483275 A0A1B0GV50 99 aa9.16□□□□□ -0.94
VARS-226ENST00000483275 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
VARS-226ENST00000483275 TEX46H3BTG2 121 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms