RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 PRO0255Q9UI72 69 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 HHLA3Q9XRX5 114 aa14.61□□□□□ -0.07
SEC13-217ENST00000482647 TMSB15BA0A087X1C1 80 aa14.6□□□□□ -0.07
SEC13-217ENST00000482647 SFTA3P0C7M3 94 aa14.6□□□□□ -0.07
SEC13-217ENST00000482647 RNF212Q495C1 297 aa14.6□□□□□ -0.07
SEC13-217ENST00000482647 TMEM250H0YL14 139 aa14.59□□□□□ -0.07
SEC13-217ENST00000482647 H3BVH4 76 aa14.59□□□□□ -0.07
SEC13-217ENST00000482647 PAX4O43316 350 aa14.59□□□□□ -0.07
SEC13-217ENST00000482647 ARMS2P0C7Q2 107 aa14.59□□□□□ -0.07
SEC13-217ENST00000482647 MGST1P10620 155 aaKnown RBP14.59□□□□□ -0.07
SEC13-217ENST00000482647 VSIG2Q96IQ7 327 aa14.59□□□□□ -0.07
SEC13-217ENST00000482647 EIF5A2Q9GZV4 153 aaKnown RBP14.59□□□□□ -0.07
SEC13-217ENST00000482647 PGPEP1LA6NFU8 196 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 IGLV2-8P01709 118 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 CRYBA4P53673 196 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 PIK3CD-AS1Q5SR53 167 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 ZNF575Q86XF7 245 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 DAZAP1Q96EP5 407 aaKnown RBP14.58□□□□□ -0.08
SEC13-217ENST00000482647 BIN3Q9NQY0 253 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 MUC4Q99102 2169 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 KMT2AQ03164 3969 aa14.58□□□□□ -0.08
SEC13-217ENST00000482647 CIDEAO60543 219 aa14.57□□□□□ -0.08
SEC13-217ENST00000482647 CCL18P55774 89 aa14.57□□□□□ -0.08
SEC13-217ENST00000482647 TOR2AQ5JU69 321 aa14.57□□□□□ -0.08
SEC13-217ENST00000482647 TRBV20OR9-2A0A075B6H5 130 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 RS1O15537 224 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 CFAP126Q5VTH2 177 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 SYT8Q8NBV8 401 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 FAM210AQ96ND0 272 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 SCRT2Q9NQ03 307 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 PHLDA3Q9Y5J5 127 aa14.56□□□□□ -0.08
SEC13-217ENST00000482647 NDUFS6O75380 124 aaKnown RBP14.55□□□□□ -0.08
SEC13-217ENST00000482647 CXCL1P09341 107 aa14.55□□□□□ -0.08
SEC13-217ENST00000482647 FAM3BP58499 235 aaPredicted RBP14.55□□□□□ -0.08
SEC13-217ENST00000482647 RPL19P84098 196 aaKnown RBP14.55□□□□□ -0.08
SEC13-217ENST00000482647 A8MWV9 139 aa14.54□□□□□ -0.08
SEC13-217ENST00000482647 MED14OSP0DP75 135 aa14.54□□□□□ -0.08
SEC13-217ENST00000482647 PCNPQ8WW12 178 aaKnown RBP14.54□□□□□ -0.08
SEC13-217ENST00000482647 PARLQ9H300 379 aa14.54□□□□□ -0.08
SEC13-217ENST00000482647 ICOSQ9Y6W8 199 aa14.54□□□□□ -0.08
SEC13-217ENST00000482647 A0A096LPF7 62 aa14.53□□□□□ -0.08
SEC13-217ENST00000482647 CEBPGP53567 150 aa14.53□□□□□ -0.08
SEC13-217ENST00000482647 DMRTA1Q5VZB9 504 aa14.53□□□□□ -0.08
SEC13-217ENST00000482647 C19orf71A6NCJ1 209 aa14.52□□□□□ -0.09
SEC13-217ENST00000482647 ZFP82Q8N141 532 aa14.52□□□□□ -0.09
SEC13-217ENST00000482647 IGHV3-73A0A0B4J1V6 119 aa14.51□□□□□ -0.09
SEC13-217ENST00000482647 P01737 135 aa14.51□□□□□ -0.09
SEC13-217ENST00000482647 GATA1P15976 413 aaPredicted RBP14.51□□□□□ -0.09
SEC13-217ENST00000482647 RPS20P60866 119 aaKnown RBP14.51□□□□□ -0.09
SEC13-217ENST00000482647 MRPL23Q16540 153 aaKnown RBP14.51□□□□□ -0.09
SEC13-217ENST00000482647 ZFP2Q6ZN57 461 aa14.51□□□□□ -0.09
SEC13-217ENST00000482647 OR2D3Q8NGH3 330 aa14.51□□□□□ -0.09
SEC13-217ENST00000482647 OCC1Q8TAD7 63 aa14.51□□□□□ -0.09
SEC13-217ENST00000482647 LINC00588Q9Y4M8 146 aa14.51□□□□□ -0.09
SEC13-217ENST00000482647 DNAH6Q9C0G6 4158 aa14.5□□□□□ -0.09
SEC13-217ENST00000482647 M0R381 172 aa14.5□□□□□ -0.09
SEC13-217ENST00000482647 GYPEP15421 78 aa14.5□□□□□ -0.09
SEC13-217ENST00000482647 ESRGQ1W209 222 aa14.5□□□□□ -0.09
SEC13-217ENST00000482647 SSBP4Q9BWG4 385 aaPredicted RBP14.5□□□□□ -0.09
SEC13-217ENST00000482647 XKRY2A2RUG3 117 aa14.49□□□□□ -0.09
SEC13-217ENST00000482647 TRBV6-4A0A1B0GX49 114 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 K7EQD1 137 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 SRP19P09132 144 aaKnown RBP14.48□□□□□ -0.09
SEC13-217ENST00000482647 OR5AL1P0C617 328 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 SRIP30626 198 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 SLC25A29Q8N8R3 303 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 SFRP2Q96HF1 295 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 SMIM7Q9BQ49 75 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 JPT2Q9H910 190 aa14.48□□□□□ -0.09
SEC13-217ENST00000482647 K7EN84 100 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 SNAI2O43623 268 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 RAB14P61106 215 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 PEA15Q15121 130 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 NEGR1Q7Z3B1 354 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 NUDT10Q8NFP7 164 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 NUDT11Q96G61 164 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 PRADC1Q9BSG0 188 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 SAMD10Q9BYL1 202 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 LY96Q9Y6Y9 160 aa14.47□□□□□ -0.09
SEC13-217ENST00000482647 ZNF727A8MUV8 499 aa14.46□□□□□ -0.09
SEC13-217ENST00000482647 RHODO00212 210 aa14.46□□□□□ -0.09
SEC13-217ENST00000482647 RHOHQ15669 191 aa14.46□□□□□ -0.09
SEC13-217ENST00000482647 SPANXN1Q5VSR9 72 aa14.46□□□□□ -0.09
SEC13-217ENST00000482647 OR10AG1Q8NH19 301 aa14.46□□□□□ -0.09
SEC13-217ENST00000482647 SMDT1Q9H4I9 107 aa14.46□□□□□ -0.09
SEC13-217ENST00000482647 IGLV2-18A0A075B6J9 118 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 NXPH4O95158 308 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 GZMBP10144 247 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 UFSP1Q6NVU6 142 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 SH2D6Q7Z4S9 175 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 ZNRF2Q8NHG8 242 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 TPPP3Q9BW30 176 aa14.45□□□□□ -0.1
SEC13-217ENST00000482647 RNASE7Q9H1E1 156 aaKnown RBP14.45□□□□□ -0.1
SEC13-217ENST00000482647 MRPS16Q9Y3D3 137 aaKnown RBP14.45□□□□□ -0.1
SEC13-217ENST00000482647 FAM74A4Q5TZK3 123 aa14.44□□□□□ -0.1
SEC13-217ENST00000482647 LYPD5Q6UWN5 251 aa14.44□□□□□ -0.1
SEC13-217ENST00000482647 FER1L6-AS1Q8NA97 138 aa14.44□□□□□ -0.1
SEC13-217ENST00000482647 RPP21Q9H633 154 aaKnown RBP14.44□□□□□ -0.1
SEC13-217ENST00000482647 A0A087WWL8 130 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 MUC21A0A0G2JKD1 596 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 389.9 ms