RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 RHOHQ15669 191 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 CDPF1Q6NVV7 123 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 Q6ZSN1 163 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 C10orf126Q8N4M7 172 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 FAT1Q14517 4588 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 CTXND1A0A1B0GTU2 59 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 IFNA7P01567 189 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 OR10J3Q5JRS4 329 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 SAPCD1Q5SSQ6 148 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 OR2T35Q8NGX2 323 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 ARL2-SNX15V9GYD0 113 aa12.47□□□□□ -0.41
CLK1-211ENST00000481641 IGHV3-30P01768 117 aa12.46□□□□□ -0.41
CLK1-211ENST00000481641 IGHV3-33P01772 117 aa12.46□□□□□ -0.41
CLK1-211ENST00000481641 IGHV3-30-3P0DP02 117 aa12.46□□□□□ -0.41
CLK1-211ENST00000481641 IGHV3-30-5P0DP03 117 aa12.46□□□□□ -0.41
CLK1-211ENST00000481641 LINC01556Q5JQF7 62 aa12.46□□□□□ -0.41
CLK1-211ENST00000481641 PTH2Q96A98 100 aa12.46□□□□□ -0.41
CLK1-211ENST00000481641 TRAV8-6A0A0B4J262 113 aa12.45□□□□□ -0.42
CLK1-211ENST00000481641 G3V3Q6 166 aa12.45□□□□□ -0.42
CLK1-211ENST00000481641 PEX7O00628 323 aa12.45□□□□□ -0.42
CLK1-211ENST00000481641 CIDEAO60543 219 aa12.45□□□□□ -0.42
CLK1-211ENST00000481641 JPT2Q9H910 190 aa12.45□□□□□ -0.42
CLK1-211ENST00000481641 Q9HAA7 133 aa12.45□□□□□ -0.42
CLK1-211ENST00000481641 FAM74A7A6NL05 159 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 IBA57-AS1B1ANH7 110 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
CLK1-211ENST00000481641 LGALSLQ3ZCW2 172 aaPredicted RBP12.44□□□□□ -0.42
CLK1-211ENST00000481641 LELP1Q5T871 98 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 Q86TA4 180 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 ATP6V0E2Q8NHE4 81 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 PARLQ9H300 379 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 Q9UF83 564 aa12.44□□□□□ -0.42
CLK1-211ENST00000481641 LRCOL1A6NCL2 159 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 FABP5P3A8MUU1 101 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 EPM2AB3EWF7 344 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 PSCAO43653 123 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 MGST1P10620 155 aaKnown RBP12.43□□□□□ -0.42
CLK1-211ENST00000481641 CRIP1P50238 77 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 AKR1C8PQ5T2L2 129 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 Q8N3U1 123 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 SAMD10Q9BYL1 202 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 GTSF1LQ9H1H1 148 aa12.43□□□□□ -0.42
CLK1-211ENST00000481641 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 GCSHP23434 173 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 ASIPP42127 132 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 GAGE1Q13065 139 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 GAGE4Q13068 117 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 GAGE5Q13069 117 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 CYTL1Q9NRR1 136 aa12.42□□□□□ -0.42
CLK1-211ENST00000481641 B4DEV8 164 aa12.41□□□□□ -0.42
CLK1-211ENST00000481641 SMLR1H3BR10 107 aa12.41□□□□□ -0.42
CLK1-211ENST00000481641 H3BVH4 76 aa12.41□□□□□ -0.42
CLK1-211ENST00000481641 M0R036 132 aa12.41□□□□□ -0.42
CLK1-211ENST00000481641 ARPC5O15511 151 aa12.41□□□□□ -0.42
CLK1-211ENST00000481641 HAMPP81172 84 aa12.41□□□□□ -0.42
CLK1-211ENST00000481641 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
CLK1-211ENST00000481641 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.42
CLK1-211ENST00000481641 A8MWV9 139 aa12.4□□□□□ -0.42
CLK1-211ENST00000481641 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
CLK1-211ENST00000481641 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
CLK1-211ENST00000481641 C14orf178Q8N769 122 aaPredicted RBP12.4□□□□□ -0.42
CLK1-211ENST00000481641 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.42
CLK1-211ENST00000481641 KRBOX1C9JBD0 128 aa12.39□□□□□ -0.43
CLK1-211ENST00000481641 SH2D1AO60880 128 aa12.39□□□□□ -0.43
CLK1-211ENST00000481641 ZFP2Q6ZN57 461 aa12.39□□□□□ -0.43
CLK1-211ENST00000481641 HIST1H2BAQ96A08 127 aa12.39□□□□□ -0.43
CLK1-211ENST00000481641 IL36BQ9NZH7 164 aa12.39□□□□□ -0.43
CLK1-211ENST00000481641 IGLV5-52A0A0A0MRZ9 124 aa12.38□□□□□ -0.43
CLK1-211ENST00000481641 SMR3BP02814 79 aaPredicted RBP12.38□□□□□ -0.43
CLK1-211ENST00000481641 ARMS2P0C7Q2 107 aa12.38□□□□□ -0.43
CLK1-211ENST00000481641 LINC00694P0DN24 101 aa12.38□□□□□ -0.43
CLK1-211ENST00000481641 FHITP49789 147 aa12.38□□□□□ -0.43
CLK1-211ENST00000481641 NKX6-2Q9C056 277 aaPredicted RBP12.38□□□□□ -0.43
CLK1-211ENST00000481641 TMSB15BA0A087X1C1 80 aa12.37□□□□□ -0.43
CLK1-211ENST00000481641 PIK3CD-AS1Q5SR53 167 aa12.37□□□□□ -0.43
CLK1-211ENST00000481641 Q5VSD8 79 aa12.37□□□□□ -0.43
CLK1-211ENST00000481641 UBE2G1P62253 170 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 RGS21Q2M5E4 152 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 CST9LP1Q5W188 147 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 Q8N814 137 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 FMC1Q96HJ9 113 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 ZFP30Q9Y2G7 519 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 VPS13BQ7Z7G8 4022 aa12.36□□□□□ -0.43
CLK1-211ENST00000481641 DNAH8Q96JB1 4490 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 A0A087WWL8 130 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 WFDC2Q14508 124 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 FAM162BQ5T6X4 162 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 FAM74A4Q5TZK3 123 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 COX8CQ7Z4L0 72 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 DAZ4Q86SG3 579 aaKnown RBP12.35□□□□□ -0.43
CLK1-211ENST00000481641 OR11H4Q8NGC9 324 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 DAZ3Q9NR90 486 aaKnown RBP12.35□□□□□ -0.43
CLK1-211ENST00000481641 BOLA1Q9Y3E2 137 aa12.35□□□□□ -0.43
CLK1-211ENST00000481641 INAFM2P0DMQ5 153 aa12.34□□□□□ -0.43
CLK1-211ENST00000481641 ZNF674Q2M3X9 581 aa12.34□□□□□ -0.43
CLK1-211ENST00000481641 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms