RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	TRBV10-1	A0A0K0K1A3	114 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	RS1	O15537	224 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	SH2D1A	O60880	128 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	IGLC6	P0CF74	106 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	CTRL	P40313	264 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	RAB14	P61106	215 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	CACNG7	P62955	275 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	PNRC1	Q12796	327 aa	Predicted RBP	3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	ZNF876P	Q49A33	203 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	UFSP1	Q6NVU6	142 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525		Q6ZTI0	123 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	ZFP82	Q8N141	532 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	DERL1	Q9BUN8	251 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	MDFIC	Q9P1T7	246 aa		3.57	□□□□□ -1.84
HDAC6-223	ENST00000480525	TRGV2	A0A075B6R0	118 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	TRGV1	A0A0A0MS02	117 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	DEFB4A	O15263	64 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525		P01737	135 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	SRP19	P09132	144 aa	Known RBP	3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	LINC00694	P0DN24	101 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	GATA1	P15976	413 aa	Predicted RBP	3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	S100A4	P26447	101 aa	Known RBP	3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	CRYBA4	P53673	196 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	FHL2	Q14192	279 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	MRPL23	Q16540	153 aa	Known RBP	3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	TOR2A	Q5JU69	321 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	MUC21	Q5SSG8	566 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	LINC01551	Q86U37	167 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	OR10G8	Q8NGN5	311 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	DAZAP1	Q96EP5	407 aa	Known RBP	3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	SFRP2	Q96HF1	295 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	SMIM7	Q9BQ49	75 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	EIF5A2	Q9GZV4	153 aa	Known RBP	3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	OSTC	Q9NRP0	149 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	SACS	Q9NZJ4	4579 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	VPS13D	Q5THJ4	4388 aa		3.56	□□□□□ -1.84
HDAC6-223	ENST00000480525	KMT2A	Q03164	3969 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525		A0A1B0GW15	77 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	GAGE12B	A1L429	117 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	ZNF727	A8MUV8	499 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525		A8MWL6	223 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	IGLL5	B9A064	214 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525		J3KRW8	73 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	GNRH2	O43555	120 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	GAGE7	O76087	117 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	IGHV3-53	P01767	116 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	ARMS2	P0C7Q2	107 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	GAGE12F	P0CL80	117 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	GAGE12G	P0CL81	117 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	GAGE12I	P0CL82	117 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	DEFB130B	P0DP73	79 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	DEFB130A	P0DP74	79 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	HTN1	P15515	57 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	HOXA5	P20719	270 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	EMP1	P54849	157 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	CCL18	P55774	89 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	RAB4B	P61018	213 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	RHOH	Q15669	191 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	TMEM241	Q24JQ0	296 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	CFAP126	Q5VTH2	177 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	PRR27	Q6MZM9	219 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	TMEM88	Q6PEY1	159 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525		Q6ZQT7	251 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	POM121L12	Q8N7R1	296 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	OR4C5	Q8NGB2	326 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	OCC1	Q8TAD7	63 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	VSIG2	Q96IQ7	327 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	SGK494	Q96LW2	274 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	AP1S3	Q96PC3	154 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	RPP21	Q9H633	154 aa	Known RBP	3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	NAT8	Q9UHE5	227 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	HHLA3	Q9XRX5	114 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	PHLDA3	Q9Y5J5	127 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	ICOS	Q9Y6W8	199 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525	RYR2	Q92736	4967 aa		3.55	□□□□□ -1.84
HDAC6-223	ENST00000480525		A0A087WWC5	75 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525		A0A1B0GV50	99 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525		F5H768	121 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525		H7C1H1	209 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525		K7EN84	100 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	PPP1R2P9	O14990	202 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	PRM2	P04554	102 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	CRYGD	P07320	174 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	TRGC1	P0CF51	173 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	IFITM2	Q01629	132 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	TMEM97	Q5BJF2	176 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	TTC32	Q5I0X7	151 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	SOHLH1	Q5JUK2	328 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	ZFAND6	Q6FIF0	208 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	NEGR1	Q7Z3B1	354 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	C15orf54	Q8N8G6	183 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	FER1L6-AS1	Q8NA97	138 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	NUDT10	Q8NFP7	164 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	TSKU	Q8WUA8	353 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	NUDT11	Q96G61	164 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	PRADC1	Q9BSG0	188 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	CHCHD7	Q9BUK0	85 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	TMEM242	Q9NWH2	141 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	NAGK	Q9UJ70	344 aa		3.54	□□□□□ -1.84
HDAC6-223	ENST00000480525	MRPS16	Q9Y3D3	137 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms