RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SMIM9A6NGZ8 99 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 K7EN84 100 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 ZNF324O75467 553 aaPredicted RBP10.3□□□□□ -0.76
USP11-207ENST00000478596 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 ASIPP42127 132 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 ERVFC1-1P60608 527 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 IBA57Q5T440 356 aaKnown RBP10.3□□□□□ -0.76
USP11-207ENST00000478596 LINC01551Q86U37 167 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 C15orf54Q8N8G6 183 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
USP11-207ENST00000478596 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 X6R8D5 127 aa10.3□□□□□ -0.76
USP11-207ENST00000478596 XKRY2A2RUG3 117 aa10.29□□□□□ -0.76
USP11-207ENST00000478596 Q6ZTC4 211 aa10.29□□□□□ -0.76
USP11-207ENST00000478596 COX8CQ7Z4L0 72 aa10.29□□□□□ -0.76
USP11-207ENST00000478596 OR2D3Q8NGH3 330 aa10.29□□□□□ -0.76
USP11-207ENST00000478596 NEU1Q99519 415 aa10.29□□□□□ -0.76
USP11-207ENST00000478596 RNASE7Q9H1E1 156 aaKnown RBP10.29□□□□□ -0.76
USP11-207ENST00000478596 IGLV2-18A0A075B6J9 118 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 GATCO43716 136 aaKnown RBP10.28□□□□□ -0.76
USP11-207ENST00000478596 PRM2P04554 102 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 TYMSP04818 313 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
USP11-207ENST00000478596 RPL19P84098 196 aaKnown RBP10.28□□□□□ -0.76
USP11-207ENST00000478596 TNP2Q05952 138 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 RPP21Q9H633 154 aaKnown RBP10.28□□□□□ -0.76
USP11-207ENST00000478596 TP53TG3Q9ULZ0 132 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 FAT1Q14517 4588 aa10.28□□□□□ -0.76
USP11-207ENST00000478596 GRIFINA4D1Z8 144 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 CRIP1P50238 77 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 RPS20P60866 119 aaKnown RBP10.27□□□□□ -0.77
USP11-207ENST00000478596 PNRC1Q12796 327 aaPredicted RBP10.27□□□□□ -0.77
USP11-207ENST00000478596 LINC01559Q495D7 138 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 ZNF493Q6ZR52 646 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 SLC7A5P1Q8MH63 180 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 Q8NAQ8 132 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 NDUFAF3Q9BU61 184 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 C11orf21Q9P2W6 132 aa10.27□□□□□ -0.77
USP11-207ENST00000478596 H3BVH4 76 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 ADCYAP1P18509 176 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 AZU1P20160 251 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
USP11-207ENST00000478596 ISOC2Q96AB3 205 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 SEC11CQ9BY50 192 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 GSN-AS1Q9NRJ2 163 aa10.26□□□□□ -0.77
USP11-207ENST00000478596 C19orf71A6NCJ1 209 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 KRBOX1C9JBD0 128 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 GNRH2O43555 120 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 TDRG1Q3Y452 100 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 OR10G8Q8NGN5 311 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
USP11-207ENST00000478596 NOP10Q9NPE3 64 aaKnown RBP10.25□□□□□ -0.77
USP11-207ENST00000478596 TRGV1A0A0A0MS02 117 aa10.24□□□□□ -0.77
USP11-207ENST00000478596 IGKV3D-20A0A0C4DH25 116 aa10.24□□□□□ -0.77
USP11-207ENST00000478596 TEX48A0A1B0GUV7 120 aa10.24□□□□□ -0.77
USP11-207ENST00000478596 TCL1AP56279 114 aa10.24□□□□□ -0.77
USP11-207ENST00000478596 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
USP11-207ENST00000478596 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
USP11-207ENST00000478596 HMCN2Q8NDA2 5059 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 IGHV3-16A0A0C4DH30 117 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 APOC3P02656 99 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 MT-ND4LP03901 98 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 GZMBP10144 247 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 FAM222AQ5U5X8 452 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 BORCS7Q96B45 105 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 OSTCQ9NRP0 149 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 MRPL16Q9NX20 251 aaKnown RBP10.23□□□□□ -0.77
USP11-207ENST00000478596 MDFICQ9P1T7 246 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
USP11-207ENST00000478596 A8MWL6 223 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 PPP1R2P9O14990 202 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 SPART-AS1P0CW21 52 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 DAD1P61803 113 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 UBE2DNLQ8IWF7 75 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 FER1L6-AS1Q8NA97 138 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 SYT8Q8NBV8 401 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 SPXQ9BT56 116 aa10.22□□□□□ -0.77
USP11-207ENST00000478596 TRGV2A0A075B6R0 118 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 GAGE12BA1L429 117 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 LYRM9A8MSI8 78 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 M0R381 172 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 GAGE7O76087 117 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 CXCL1P09341 107 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 ARMS2P0C7Q2 107 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 GAGE12FP0CL80 117 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 GAGE12GP0CL81 117 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 GAGE12IP0CL82 117 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 SSTP61278 116 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
USP11-207ENST00000478596 CARHSP1Q9Y2V2 147 aaKnown RBP10.21□□□□□ -0.77
USP11-207ENST00000478596 M0R2P5 195 aa10.2□□□□□ -0.78
USP11-207ENST00000478596 RNF212Q495C1 297 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms