RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 Q9UF83 564 aa13.02□□□□□ -0.33
PDLIM1-202ENST00000477757 ARL6IP6Q8N6S5 226 aa13.01□□□□□ -0.33
PDLIM1-202ENST00000477757 LINC00479Q96M42 142 aa13.01□□□□□ -0.33
PDLIM1-202ENST00000477757 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.01□□□□□ -0.33
PDLIM1-202ENST00000477757 RNASE3P12724 160 aaKnown RBP13□□□□□ -0.33
PDLIM1-202ENST00000477757 NHLH2Q02577 135 aa13□□□□□ -0.33
PDLIM1-202ENST00000477757 ELOBQ15370 118 aa13□□□□□ -0.33
PDLIM1-202ENST00000477757 FAM74A1Q5RGS3 127 aa13□□□□□ -0.33
PDLIM1-202ENST00000477757 WDR61Q9GZS3 305 aaKnown RBP13□□□□□ -0.33
PDLIM1-202ENST00000477757 A0A087WX48 190 aa12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 PGPA6NDG6 321 aa12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 ZNF80P51504 273 aaPredicted RBP12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 FGF8P55075 233 aaPredicted RBP12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 TAS2R45P59539 299 aa12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 Q0VG73 95 aa12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 C1orf43Q9BWL3 253 aa12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 SAMD10Q9BYL1 202 aa12.99□□□□□ -0.33
PDLIM1-202ENST00000477757 A0A0D9SG52 128 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 A8MWV9 139 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 PANO1I0J062 215 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 TAAR5O14804 337 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 C14orf178Q8N769 122 aaPredicted RBP12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 TMEM75Q8N9X5 138 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 OR2T35Q8NGX2 323 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 SEC22CQ9BRL7 303 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 NDFIP1Q9BT67 221 aa12.98□□□□□ -0.33
PDLIM1-202ENST00000477757 USP17L23D6RBM5 183 aa12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 C17orf112F2Z3M2 114 aa12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 FFAR4Q5NUL3 377 aa12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 PIK3CD-AS1Q5SR53 167 aa12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 UFSP1Q6NVU6 142 aa12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 C9orf163Q8N9P6 203 aa12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
PDLIM1-202ENST00000477757 GNG5P63218 68 aa12.96□□□□□ -0.33
PDLIM1-202ENST00000477757 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
PDLIM1-202ENST00000477757 MBD2Q9UBB5 411 aa12.96□□□□□ -0.33
PDLIM1-202ENST00000477757 DGAT2L7PQ6IED9 249 aa12.95□□□□□ -0.34
PDLIM1-202ENST00000477757 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
PDLIM1-202ENST00000477757 GCGP01275 180 aa12.94□□□□□ -0.34
PDLIM1-202ENST00000477757 PRSS1P07477 247 aa12.94□□□□□ -0.34
PDLIM1-202ENST00000477757 ZC2HC1AQ96GY0 325 aa12.94□□□□□ -0.34
PDLIM1-202ENST00000477757 SGK494Q96LW2 274 aa12.94□□□□□ -0.34
PDLIM1-202ENST00000477757 EIF3GO75821 320 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 IL7P13232 177 aa12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 LGALSLQ3ZCW2 172 aaPredicted RBP12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 HSD17B11Q8NBQ5 300 aa12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 OR10G7Q8NGN6 311 aa12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 OR5AC2Q9NZP5 309 aa12.93□□□□□ -0.34
PDLIM1-202ENST00000477757 TRAV6A0A075B6T7 132 aa12.92□□□□□ -0.34
PDLIM1-202ENST00000477757 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
PDLIM1-202ENST00000477757 CIRBPQ14011 172 aaKnown RBP12.92□□□□□ -0.34
PDLIM1-202ENST00000477757 SDIM1Q6ZPB5 146 aa12.92□□□□□ -0.34
PDLIM1-202ENST00000477757 JPT2Q9H910 190 aa12.92□□□□□ -0.34
PDLIM1-202ENST00000477757 NUDT15Q9NV35 164 aa12.92□□□□□ -0.34
PDLIM1-202ENST00000477757 RHODO00212 210 aa12.91□□□□□ -0.34
PDLIM1-202ENST00000477757 HLA-DQA1P01909 254 aa12.91□□□□□ -0.34
PDLIM1-202ENST00000477757 CRPP02741 224 aa12.91□□□□□ -0.34
PDLIM1-202ENST00000477757 TCRBP04435 133 aa12.91□□□□□ -0.34
PDLIM1-202ENST00000477757 RPL19P84098 196 aaKnown RBP12.91□□□□□ -0.34
PDLIM1-202ENST00000477757 PQLC2Q6ZP29 291 aa12.91□□□□□ -0.34
PDLIM1-202ENST00000477757 ZFP69Q49AA0 526 aa12.9□□□□□ -0.34
PDLIM1-202ENST00000477757 SMUG1Q53HV7 270 aa12.9□□□□□ -0.34
PDLIM1-202ENST00000477757 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
PDLIM1-202ENST00000477757 PLA2G10O15496 165 aa12.89□□□□□ -0.35
PDLIM1-202ENST00000477757 LYRM1O43325 122 aa12.89□□□□□ -0.35
PDLIM1-202ENST00000477757 TCRAP04437 139 aa12.88□□□□□ -0.35
PDLIM1-202ENST00000477757 S100A4P26447 101 aaKnown RBP12.88□□□□□ -0.35
PDLIM1-202ENST00000477757 C15orf54Q8N8G6 183 aa12.88□□□□□ -0.35
PDLIM1-202ENST00000477757 LINC01600Q96MT4 127 aa12.88□□□□□ -0.35
PDLIM1-202ENST00000477757 DPH3P1Q9H4G8 78 aa12.88□□□□□ -0.35
PDLIM1-202ENST00000477757 ODF1Q14990 250 aa12.87□□□□□ -0.35
PDLIM1-202ENST00000477757 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
PDLIM1-202ENST00000477757 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
PDLIM1-202ENST00000477757 PSG8Q9UQ74 426 aa12.87□□□□□ -0.35
PDLIM1-202ENST00000477757 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
PDLIM1-202ENST00000477757 K7EQM0 130 aa12.86□□□□□ -0.35
PDLIM1-202ENST00000477757 MIAQ16674 131 aa12.86□□□□□ -0.35
PDLIM1-202ENST00000477757 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
PDLIM1-202ENST00000477757 CCDC160A6NGH7 325 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 TMEM262E9PQX1 116 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 GAS8-AS1O95177 125 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 UBE2D3P61077 147 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 UBE2D2P62837 147 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 FLI1Q01543 452 aaPredicted RBP12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 FAM74A4Q5TZK3 123 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 RNF185Q96GF1 192 aa12.85□□□□□ -0.35
PDLIM1-202ENST00000477757 TRBV10-1A0A0K0K1A3 114 aa12.84□□□□□ -0.35
PDLIM1-202ENST00000477757 H0YIZ8 118 aa12.84□□□□□ -0.35
PDLIM1-202ENST00000477757 ANGP03950 147 aaKnown RBP12.84□□□□□ -0.35
PDLIM1-202ENST00000477757 TRBV6-8A0A0A6YYG3 113 aa12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 H3BVH4 76 aa12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 H2AFB2P0C5Z0 115 aa12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 CNBPP62633 177 aaKnown RBP12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 RPL36AP83881 106 aaKnown RBP12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 LRRC37A5PQ49AS3 106 aa12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 PRNTQ86SH4 94 aa12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 RPL36ALQ969Q0 106 aaKnown RBP12.83□□□□□ -0.36
PDLIM1-202ENST00000477757 TRBV7-3A0A075B6L6 115 aa12.82□□□□□ -0.36
PDLIM1-202ENST00000477757 A0A087WYN8 130 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms