RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 HIST1H2BBP33778 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BDP58876 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 KRTAP10-11P60412 298 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BCP62807 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST2H2BEQ16778 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST2H2BFQ5QNW6 126 aaPredicted RBP21.02■□□□□ 0.95
VEGFA-211ENST00000476772 SPANXN1Q5VSR9 72 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BHQ93079 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BNQ99877 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 HIST1H2BMQ99879 126 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 PHLDA3Q9Y5J5 127 aa21.02■□□□□ 0.95
VEGFA-211ENST00000476772 TRGV11A0A075B6L2 103 aa21.01■□□□□ 0.95
VEGFA-211ENST00000476772 PRM2P04554 102 aa21.01■□□□□ 0.95
VEGFA-211ENST00000476772 CACNG7P62955 275 aa21.01■□□□□ 0.95
VEGFA-211ENST00000476772 EGFEM1PQ0D2K5 195 aa21■□□□□ 0.95
VEGFA-211ENST00000476772 KIAA1644Q3SXP7 199 aa21■□□□□ 0.95
VEGFA-211ENST00000476772 LINC00467Q9BRT7 94 aa21■□□□□ 0.95
VEGFA-211ENST00000476772 TMEM208Q9BTX3 173 aa21■□□□□ 0.95
VEGFA-211ENST00000476772 C1QTNF4Q9BXJ3 329 aa21■□□□□ 0.95
VEGFA-211ENST00000476772 IGHV4-4A0A075B6R2 117 aa20.99■□□□□ 0.95
VEGFA-211ENST00000476772 IGHV3OR16-12A0A075B7B8 117 aa20.99■□□□□ 0.95
VEGFA-211ENST00000476772 ZNF493Q6ZR52 646 aa20.99■□□□□ 0.95
VEGFA-211ENST00000476772 TMEM256Q8N2U0 113 aa20.99■□□□□ 0.95
VEGFA-211ENST00000476772 C9orf85Q96MD7 179 aa20.99■□□□□ 0.95
VEGFA-211ENST00000476772 M0R381 172 aa20.99■□□□□ 0.95
VEGFA-211ENST00000476772 CSTL1Q9H114 145 aa20.98■□□□□ 0.95
VEGFA-211ENST00000476772 G3V4G9 280 aa20.97■□□□□ 0.95
VEGFA-211ENST00000476772 CSNK1G2-AS1Q8NCQ2 148 aa20.97■□□□□ 0.95
VEGFA-211ENST00000476772 LOC102724200A0A096LPH7 203 aaPredicted RBP20.96■□□□□ 0.95
VEGFA-211ENST00000476772 GOLT1BQ9Y3E0 138 aa20.96■□□□□ 0.95
VEGFA-211ENST00000476772 MUC4Q99102 2169 aa20.95■□□□□ 0.95
VEGFA-211ENST00000476772 TMEM191AQ9H0A3 160 aa20.95■□□□□ 0.94
VEGFA-211ENST00000476772 NXPH4O95158 308 aa20.94■□□□□ 0.94
VEGFA-211ENST00000476772 DMRTA1Q5VZB9 504 aa20.94■□□□□ 0.94
VEGFA-211ENST00000476772 AMN1Q8IY45 258 aa20.93■□□□□ 0.94
VEGFA-211ENST00000476772 AZU1P20160 251 aa20.92■□□□□ 0.94
VEGFA-211ENST00000476772 EVI2AP22794 236 aa20.92■□□□□ 0.94
VEGFA-211ENST00000476772 ZNF415Q09FC8 603 aa20.92■□□□□ 0.94
VEGFA-211ENST00000476772 SAMD5Q5TGI4 173 aa20.92■□□□□ 0.94
VEGFA-211ENST00000476772 FAM104BQ5XKR9 115 aa20.92■□□□□ 0.94
VEGFA-211ENST00000476772 ZMAT5Q9UDW3 170 aaKnown RBP20.92■□□□□ 0.94
VEGFA-211ENST00000476772 IGHV4-30-4P0DP06 118 aa20.91■□□□□ 0.94
VEGFA-211ENST00000476772 C11orf72Q8NBR9 251 aa20.91■□□□□ 0.94
VEGFA-211ENST00000476772 GSN-AS1Q9NRJ2 163 aa20.91■□□□□ 0.94
VEGFA-211ENST00000476772 SRIP30626 198 aa20.9■□□□□ 0.94
VEGFA-211ENST00000476772 PKD1L1Q8TDX9 2849 aa20.9■□□□□ 0.94
VEGFA-211ENST00000476772 NDUFA6P56556 154 aa20.89■□□□□ 0.94
VEGFA-211ENST00000476772 SMIM15Q7Z3B0 74 aa20.89■□□□□ 0.94
VEGFA-211ENST00000476772 S100A6P06703 90 aa20.89■□□□□ 0.93
VEGFA-211ENST00000476772 ZNF705AQ6ZN79 300 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-211ENST00000476772 KIR2DL5BA0A0G2JN68 375 aa20.88■□□□□ 0.93
VEGFA-211ENST00000476772 KIR2DL5BA0A0G2JPC4 375 aa20.88■□□□□ 0.93
VEGFA-211ENST00000476772 KIR2DL5AQ8N109 375 aa20.88■□□□□ 0.93
VEGFA-211ENST00000476772 KIR2DL5BQ8NHK3 375 aa20.88■□□□□ 0.93
VEGFA-211ENST00000476772 RNF185Q96GF1 192 aa20.88■□□□□ 0.93
VEGFA-211ENST00000476772 APOC4P55056 127 aa20.87■□□□□ 0.93
VEGFA-211ENST00000476772 SYT8Q8NBV8 401 aa20.87■□□□□ 0.93
VEGFA-211ENST00000476772 RCHY1Q96PM5 261 aa20.87■□□□□ 0.93
VEGFA-211ENST00000476772 MRPL51Q4U2R6 128 aaKnown RBP20.86■□□□□ 0.93
VEGFA-211ENST00000476772 RNASE8Q8TDE3 154 aaKnown RBP20.86■□□□□ 0.93
VEGFA-211ENST00000476772 AP1S3Q96PC3 154 aa20.86■□□□□ 0.93
VEGFA-211ENST00000476772 ALKBH7Q9BT30 221 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-211ENST00000476772 RAB4AP20338 218 aa20.86■□□□□ 0.93
VEGFA-211ENST00000476772 C14orf178Q8N769 122 aaPredicted RBP20.85■□□□□ 0.93
VEGFA-211ENST00000476772 TMEM263Q8WUH6 116 aaKnown RBP20.85■□□□□ 0.93
VEGFA-211ENST00000476772 JPT2Q9H910 190 aa20.85■□□□□ 0.93
VEGFA-211ENST00000476772 ZNF876PQ49A33 203 aa20.84■□□□□ 0.93
VEGFA-211ENST00000476772 SNRPEP62304 92 aaKnown RBP20.83■□□□□ 0.93
VEGFA-211ENST00000476772 DPH3P1Q9H4G8 78 aa20.83■□□□□ 0.92
VEGFA-211ENST00000476772 DNAH3Q8TD57 4116 aa20.82■□□□□ 0.92
VEGFA-211ENST00000476772 D6R8Y8 96 aa20.82■□□□□ 0.92
VEGFA-211ENST00000476772 M0R2P5 195 aa20.82■□□□□ 0.92
VEGFA-211ENST00000476772 IL17DQ8TAD2 202 aa20.82■□□□□ 0.92
VEGFA-211ENST00000476772 SPXQ9BT56 116 aa20.82■□□□□ 0.92
VEGFA-211ENST00000476772 C5orf52A6NGY3 159 aa20.81■□□□□ 0.92
VEGFA-211ENST00000476772 RIPPLY3P57055 190 aa20.81■□□□□ 0.92
VEGFA-211ENST00000476772 RRN3P1Q2M238 152 aa20.81■□□□□ 0.92
VEGFA-211ENST00000476772 SMKR1H3BMG3 65 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 C18orf32Q8TCD1 76 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 C16orf74Q96GX8 76 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 U3KQK5 164 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 NCR2O95944 276 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 DEFB135Q30KP9 77 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 KIF25-AS1Q9Y6Z4 181 aa20.8■□□□□ 0.92
VEGFA-211ENST00000476772 CKS2P33552 79 aa20.79■□□□□ 0.92
VEGFA-211ENST00000476772 Q0VG73 95 aa20.79■□□□□ 0.92
VEGFA-211ENST00000476772 IQCJQ1A5X6 159 aa20.79■□□□□ 0.92
VEGFA-211ENST00000476772 OR10J3Q5JRS4 329 aa20.79■□□□□ 0.92
VEGFA-211ENST00000476772 ORMDL3Q8N138 153 aa20.79■□□□□ 0.92
VEGFA-211ENST00000476772 A0A087WWL8 130 aa20.78■□□□□ 0.92
VEGFA-211ENST00000476772 COA6Q5JTJ3 125 aaKnown RBP20.78■□□□□ 0.92
VEGFA-211ENST00000476772 PTH2Q96A98 100 aa20.78■□□□□ 0.92
VEGFA-211ENST00000476772 MRPL16Q9NX20 251 aaKnown RBP20.78■□□□□ 0.92
VEGFA-211ENST00000476772 PLAC8L1A1L4L8 177 aa20.77■□□□□ 0.92
VEGFA-211ENST00000476772 A8MZ25 164 aa20.77■□□□□ 0.92
VEGFA-211ENST00000476772 MGPP08493 103 aa20.77■□□□□ 0.92
VEGFA-211ENST00000476772 SMIM17P0DL12 118 aa20.77■□□□□ 0.92
VEGFA-211ENST00000476772 SAMD10Q9BYL1 202 aa20.77■□□□□ 0.92
VEGFA-211ENST00000476772 GAS8-AS1O95177 125 aa20.77■□□□□ 0.91
VEGFA-211ENST00000476772 PRELID3AQ96N28 172 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms