RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664		C9JAW5	83 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664		H7BYZ3	331 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664		M0R378	163 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	LGALS3	P17931	250 aa	Known RBP	4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	EVX1	P49640	407 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	KLF3	P57682	345 aa	Predicted RBP	4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	ZNF141	Q15928	474 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	WHAMMP3	Q1A5X7	153 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	C2orf83	Q53S99	150 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	MIR17HG	Q75NE6	70 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	SBSPON	Q8IVN8	264 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	TCTE3	Q8IZS6	198 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	TERB2	Q8NHR7	220 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	HIGD1A	Q9Y241	93 aa		4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	APOB	P04114	4563 aa	Known RBP	4.23	□□□□□ -1.73
LRCH3-215	ENST00000476664	AGRN	O00468	2067 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	TRAV40	A0A0B4J280	105 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	GABARAP	H6UMI1	98 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	WISP3	O95389	354 aa	Predicted RBP	4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	OR2H2	O95918	312 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	EVI2A	P22794	236 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	CD24	P25063	80 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	FKBP2	P26885	142 aa	Known RBP	4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	PSMB8	P28062	276 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	INSL3	P51460	131 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	UBE2B	P63146	152 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	LHFPL1	Q86WI0	220 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	NDUFA11	Q86Y39	141 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	HIST3H2BB	Q8N257	126 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	SCGB3A1	Q96QR1	104 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	OSTC	Q9NRP0	149 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664	HEY1	Q9Y5J3	304 aa		4.22	□□□□□ -1.73
LRCH3-215	ENST00000476664		A0A096LPI6	279 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664		A0A1B0GVY2	172 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	OR51F1	A6NGY5	319 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	C16orf90	A8MZG2	172 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	CST7	O76096	145 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	DPM2	O94777	84 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	CLPS	P04118	112 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	UCHL1	P09936	223 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	XCL1	P47992	114 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	DSCR4	P56555	118 aa	Predicted RBP	4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	NDUFA6	P56556	154 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	DNAJB13	P59910	316 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	ZNF117	Q03924	483 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	NOXRED1	Q6NXP6	359 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	ZNF880	Q6PDB4	577 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	BPIFA4P	Q86YQ2	179 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	OR10P1	Q8NGE3	313 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	STAG3L4	Q8TBR4	150 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	DCANP1	Q8TF63	244 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	NAT8B	Q9UHF3	227 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664		U3KQ87	197 aa		4.21	□□□□□ -1.74
LRCH3-215	ENST00000476664	FLG2	Q5D862	2391 aa	Predicted RBP	4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	IGHV3OR16-8	A0A075B7F1	116 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	IGHV3-15	A0A0B4J1V0	119 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664		A0A0J9YW62	118 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664		A0A1B0GV90	55 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	LINC00587	B1AMM8	73 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	OR2T1	O43869	369 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	CREBL2	O60519	120 aa	Predicted RBP	4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	LINC00483	Q53H64	154 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	KIAA2026	Q5HYC2	2103 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	OR52R1	Q8NGF1	315 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	OR2T10	Q8NGZ9	312 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	C2orf88	Q9BSF0	95 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	OTOR	Q9NRC9	128 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664	CALML5	Q9NZT1	146 aa		4.2	□□□□□ -1.74
LRCH3-215	ENST00000476664		A0A1W2PQD3	144 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	TMEM235	A6NFC5	223 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	TMEM256-PLSCR3	K7ERE1	68 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664		P0DMU3	169 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	FAM231A	P0DMU4	169 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	FAM231C	P0DMU5	169 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	SDC2	P34741	201 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	SLC38A11	Q08AI6	406 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	LCE1A	Q5T7P2	110 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	C2orf91	Q6ZV80	131 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	HIST1H2BL	Q99880	126 aa		4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	TXNL4B	Q9NX01	149 aa	Known RBP	4.19	□□□□□ -1.74
LRCH3-215	ENST00000476664	TRGV10	A0A0A0MS01	117 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	IGHV1-18	A0A0C4DH31	117 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	IGKV1-9	A0A0C4DH69	117 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	CCDC160	A6NGH7	325 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664		H3BPC8	53 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664		M0R2Z0	102 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	GZMB	P10144	247 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	HIST1H1A	Q02539	215 aa	Predicted RBP	4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	NNAT	Q16517	81 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	VMA21	Q3ZAQ7	101 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	DNLZ	Q5SXM8	178 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	ZNF695	Q8IW36	515 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	GINS4	Q9BRT9	223 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	MUC2	Q02817	5179 aa		4.18	□□□□□ -1.74
LRCH3-215	ENST00000476664	MEIS3P1	A6NDR6	274 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	C17orf98	A8MV24	154 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664		M0R233	179 aa		4.17	□□□□□ -1.74
LRCH3-215	ENST00000476664	SLC22A1	O15245	554 aa		4.17	□□□□□ -1.74

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