RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 TXNDC17Q9BRA2 123 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 DNAH2Q9P225 4427 aa13.94□□□□□ -0.18
HLA-B-252ENST00000474381 KRBOX1C9JBD0 128 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 RS1O15537 224 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 SH2D1AO60880 128 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 ZNF506Q5JVG8 444 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 NEGR1Q7Z3B1 354 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 C9orf62Q8N4C0 152 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 PCNPQ8WW12 178 aaKnown RBP13.93□□□□□ -0.18
HLA-B-252ENST00000474381 IL36BQ9NZH7 164 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 HECTD4Q9Y4D8 3996 aa13.93□□□□□ -0.18
HLA-B-252ENST00000474381 PGPEP1LA6NFU8 196 aa13.92□□□□□ -0.18
HLA-B-252ENST00000474381 K7EQD1 137 aa13.92□□□□□ -0.18
HLA-B-252ENST00000474381 GATA1P15976 413 aaPredicted RBP13.92□□□□□ -0.18
HLA-B-252ENST00000474381 CCL20P78556 96 aa13.92□□□□□ -0.18
HLA-B-252ENST00000474381 CFAP126Q5VTH2 177 aa13.92□□□□□ -0.18
HLA-B-252ENST00000474381 GNG13Q9P2W3 67 aa13.92□□□□□ -0.18
HLA-B-252ENST00000474381 A0A1W2PPQ1 181 aa13.91□□□□□ -0.18
HLA-B-252ENST00000474381 PRSS29PA6NIE9 313 aa13.91□□□□□ -0.18
HLA-B-252ENST00000474381 SRIP30626 198 aa13.91□□□□□ -0.18
HLA-B-252ENST00000474381 LINC01559Q495D7 138 aa13.91□□□□□ -0.18
HLA-B-252ENST00000474381 GYPEP15421 78 aa13.9□□□□□ -0.18
HLA-B-252ENST00000474381 SH2D6Q7Z4S9 175 aa13.9□□□□□ -0.18
HLA-B-252ENST00000474381 BAGE2Q86Y30 109 aa13.9□□□□□ -0.18
HLA-B-252ENST00000474381 C11orf52Q96A22 123 aa13.9□□□□□ -0.18
HLA-B-252ENST00000474381 MLST8Q9BVC4 326 aa13.9□□□□□ -0.18
HLA-B-252ENST00000474381 FAT2Q9NYQ8 4349 aa13.9□□□□□ -0.18
HLA-B-252ENST00000474381 M0R036 132 aa13.89□□□□□ -0.19
HLA-B-252ENST00000474381 LYPD5Q6UWN5 251 aa13.89□□□□□ -0.19
HLA-B-252ENST00000474381 C6orf223Q8N319 242 aa13.89□□□□□ -0.19
HLA-B-252ENST00000474381 TRBV6-4A0A1B0GX49 114 aa13.88□□□□□ -0.19
HLA-B-252ENST00000474381 A8MWV9 139 aa13.88□□□□□ -0.19
HLA-B-252ENST00000474381 IFNA1P01562 189 aa13.88□□□□□ -0.19
HLA-B-252ENST00000474381 BTF3P20290 206 aaKnown RBP13.88□□□□□ -0.19
HLA-B-252ENST00000474381 A0A1B0GVY2 172 aa13.87□□□□□ -0.19
HLA-B-252ENST00000474381 H3BVH4 76 aa13.87□□□□□ -0.19
HLA-B-252ENST00000474381 ARMS2P0C7Q2 107 aa13.87□□□□□ -0.19
HLA-B-252ENST00000474381 MGST1P10620 155 aaKnown RBP13.87□□□□□ -0.19
HLA-B-252ENST00000474381 ZFP2Q6ZN57 461 aa13.87□□□□□ -0.19
HLA-B-252ENST00000474381 NHLRC2Q8NBF2 726 aa13.87□□□□□ -0.19
HLA-B-252ENST00000474381 DNAH17Q9UFH2 4485 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 SIVA1O15304 175 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 NXPH4O95158 308 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 RPL35P42766 123 aaKnown RBP13.86□□□□□ -0.19
HLA-B-252ENST00000474381 MEF2BQ02080 365 aaPredicted RBP13.86□□□□□ -0.19
HLA-B-252ENST00000474381 RHOHQ15669 191 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 ZNF575Q86XF7 245 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 SLC25A29Q8N8R3 303 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 SYT8Q8NBV8 401 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 SCRT2Q9NQ03 307 aa13.86□□□□□ -0.19
HLA-B-252ENST00000474381 GRIFINA4D1Z8 144 aa13.85□□□□□ -0.19
HLA-B-252ENST00000474381 PDE6DO43924 150 aa13.85□□□□□ -0.19
HLA-B-252ENST00000474381 CXCL1P09341 107 aa13.85□□□□□ -0.19
HLA-B-252ENST00000474381 TAGLN2P37802 199 aaKnown RBP13.85□□□□□ -0.19
HLA-B-252ENST00000474381 TIRAPP58753 221 aa13.85□□□□□ -0.19
HLA-B-252ENST00000474381 KRTAP1-5Q9BYS1 174 aa13.85□□□□□ -0.19
HLA-B-252ENST00000474381 PARLQ9H300 379 aa13.85□□□□□ -0.19
HLA-B-252ENST00000474381 LOC100131303A0A0U1RQF7 123 aa13.84□□□□□ -0.19
HLA-B-252ENST00000474381 MED14OSP0DP75 135 aa13.84□□□□□ -0.19
HLA-B-252ENST00000474381 BCL2P10415 239 aa13.84□□□□□ -0.19
HLA-B-252ENST00000474381 PHLDA3Q9Y5J5 127 aa13.84□□□□□ -0.19
HLA-B-252ENST00000474381 TMSB15BA0A087X1C1 80 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 IGHV3-73A0A0B4J1V6 119 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 RHODO00212 210 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 DMRTA1Q5VZB9 504 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 SMIM12Q96EX1 92 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 VAX2Q9UIW0 290 aa13.83□□□□□ -0.2
HLA-B-252ENST00000474381 UFSP1Q6NVU6 142 aa13.82□□□□□ -0.2
HLA-B-252ENST00000474381 A0A1B0GVG6 124 aa13.81□□□□□ -0.2
HLA-B-252ENST00000474381 K7EP13 123 aa13.81□□□□□ -0.2
HLA-B-252ENST00000474381 CENPWQ5EE01 88 aa13.81□□□□□ -0.2
HLA-B-252ENST00000474381 ALKAL2Q6UX46 152 aa13.81□□□□□ -0.2
HLA-B-252ENST00000474381 ZFP82Q8N141 532 aa13.81□□□□□ -0.2
HLA-B-252ENST00000474381 BLOC1S1P78537 153 aa13.8□□□□□ -0.2
HLA-B-252ENST00000474381 PRR27Q6MZM9 219 aa13.8□□□□□ -0.2
HLA-B-252ENST00000474381 SFRP2Q96HF1 295 aa13.8□□□□□ -0.2
HLA-B-252ENST00000474381 JPT2Q9H910 190 aa13.8□□□□□ -0.2
HLA-B-252ENST00000474381 BOLA1Q9Y3E2 137 aa13.8□□□□□ -0.2
HLA-B-252ENST00000474381 RPL19P84098 196 aaKnown RBP13.79□□□□□ -0.2
HLA-B-252ENST00000474381 SAMD10Q9BYL1 202 aa13.79□□□□□ -0.2
HLA-B-252ENST00000474381 LY96Q9Y6Y9 160 aa13.79□□□□□ -0.2
HLA-B-252ENST00000474381 TRAV9-2A0A087WT02 112 aa13.78□□□□□ -0.2
HLA-B-252ENST00000474381 M0R381 172 aa13.78□□□□□ -0.2
HLA-B-252ENST00000474381 IGLV2-8P01709 118 aa13.78□□□□□ -0.2
HLA-B-252ENST00000474381 GNG4P50150 75 aa13.78□□□□□ -0.2
HLA-B-252ENST00000474381 MED9Q9NWA0 146 aa13.78□□□□□ -0.2
HLA-B-252ENST00000474381 SNAI2O43623 268 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 OR5AL1P0C617 328 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 DNAH10OSP0CZ25 163 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 TNP2Q05952 138 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 Q6ZSN1 163 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 WFDC10BQ8IUB3 73 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 LYPD6BQ8NI32 183 aa13.77□□□□□ -0.21
HLA-B-252ENST00000474381 SSBP4Q9BWG4 385 aaPredicted RBP13.77□□□□□ -0.21
HLA-B-252ENST00000474381 CRYGDP07320 174 aa13.76□□□□□ -0.21
HLA-B-252ENST00000474381 NKX2-5P52952 324 aaPredicted RBP13.76□□□□□ -0.21
HLA-B-252ENST00000474381 LINC00315P59091 139 aa13.76□□□□□ -0.21
HLA-B-252ENST00000474381 ATP6V0E2Q8NHE4 81 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms